RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CCDC85CA6NKD9 419 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 GSG1L2A8MUP6 293 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 TLR2O60603 784 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 CDK8P49336 464 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 GABPAQ06546 454 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 NMIQ13287 307 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 SEPT2Q15019 361 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 C12orf60Q5U649 245 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 SMCR8Q8TEV9 937 aaPredicted RBP11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 ERO1AQ96HE7 468 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 TBC1D2Q9BYX2 928 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 TMOD4Q9NZQ9 345 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 AGTPBP1Q9UPW5 1226 aa11.65□□□□□ -0.54
RTFDC1-205ENST00000466260 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 A0A0D9SFI3 127 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 AKR1B1P15121 316 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 GNAT2P19087 354 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 BACE1P56817 501 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 CAP1Q01518 475 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 ATP2B2Q01814 1243 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 NAPBQ9H115 298 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 ZCCHC17Q9NP64 241 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 TSHZ2Q9NRE2 1034 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 LAMA4Q16363 1823 aa11.64□□□□□ -0.55
RTFDC1-205ENST00000466260 RAD21O60216 631 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 KIF22Q14807 665 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 OTOP1Q7RTM1 612 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 WDR18Q9BV38 432 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 NACAP1Q9BZK3 213 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 EFCC1Q9HA90 598 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 COL11A1P12107 1806 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
RTFDC1-205ENST00000466260 DOCK3Q8IZD9 2030 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 PATL2C9JE40 543 aaKnown RBP11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 PRDM1O75626 825 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 SDSP20132 328 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 OSBPP22059 807 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 IRX3P78415 501 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 ZNF589Q86UQ0 364 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 OSBPL3Q9H4L5 887 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 GINM1Q9NU53 330 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
RTFDC1-205ENST00000466260 ADGRA2Q96PE1 1338 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 PEX10O60683 326 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 GSPT1P15170 499 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 ICA1Q05084 483 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 PPARAQ07869 468 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 MCMDC2Q4G0Z9 681 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 SBK1Q52WX2 424 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 TTC22Q5TAA0 569 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 USP17L2Q6R6M4 530 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 C17orf99Q6UX52 265 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 PAGR1Q9BTK6 254 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 HELLSQ9NRZ9 838 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 EMILIN3Q9NT22 766 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 ROBO3Q96MS0 1386 aa11.61□□□□□ -0.55
RTFDC1-205ENST00000466260 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 RASA1P20936 1047 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 CTGFP29279 349 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 PSMC4P43686 418 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 FBXO46Q6PJ61 603 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 SLC45A1Q9Y2W3 748 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
RTFDC1-205ENST00000466260 FOXP2O15409 715 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 BCRP11274 1271 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 VCAM1P19320 739 aa11.59□□□□□ -0.55
RTFDC1-205ENST00000466260 USP14P54578 494 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms