RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
RPUSD3-212ENST00000466141 PAK6Q9NQU5 681 aaPredicted RBP8.7□□□□□ -1.02
RPUSD3-212ENST00000466141 TMOD2Q9NZR1 351 aa8.7□□□□□ -1.02
RPUSD3-212ENST00000466141 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
RPUSD3-212ENST00000466141 USTQ9Y2C2 406 aa8.7□□□□□ -1.02
RPUSD3-212ENST00000466141 DOCK2Q92608 1830 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 TNPO2O14787 897 aaKnown RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 SRGAP3O43295 1099 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 PDE8BO95263 885 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 MS4A1P11836 297 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 PUM3Q15397 648 aaKnown RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 ZRSR2Q15696 482 aaKnown RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 LRIT3Q3SXY7 679 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 CEP85Q6P2H3 762 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 FAM83AQ86UY5 434 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 TDHQ8IZJ6 230 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 SSH3Q8TE77 659 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 ZDHHC15Q96MV8 337 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 TSPYL1Q9H0U9 437 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 SIL1Q9H173 461 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 GOLGA6AQ9NYA3 693 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 MAGEC2Q9UBF1 373 aaPredicted RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 FRMD4BQ9Y2L6 1034 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 RPAP1Q9BWH6 1393 aaPredicted RBP8.69□□□□□ -1.02
RPUSD3-212ENST00000466141 MYH2Q9UKX2 1941 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 SLURP2P0DP57 97 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 RRP1P56182 461 aaKnown RBP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 TCP10Q12799 353 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 NFIAQ12857 509 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 TRIM32Q13049 653 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 CCDC181Q5TID7 509 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 MORC4Q8TE76 937 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 PXYLP1Q8TE99 480 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 FAM161BQ96MY7 647 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 GUCD1Q96NT3 240 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 UBE2OQ9C0C9 1292 aaKnown RBP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 ZBTB40Q9NUA8 1239 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 ZNF112Q9UJU3 913 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 DDX19BQ9UMR2 479 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 DDX60LQ5H9U9 1706 aaKnown RBP8.68□□□□□ -1.02
RPUSD3-212ENST00000466141 DHX16O60231 1041 aaKnown RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 FRAT2O75474 233 aaPredicted RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 MYH7P12883 1935 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 SCP2P22307 547 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 CLCN1P35523 988 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 IL15P40933 162 aaPredicted RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 HDLBPQ00341 1268 aaKnown RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 FOXD4Q12950 439 aaPredicted RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 NOL9Q5SY16 702 aaKnown RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 FKBP1CQ5VVH2 108 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 GADL1Q6ZQY3 521 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 FBXO33Q7Z6M2 555 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 VPS37DQ86XT2 251 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 ZFPM1Q8IX07 1006 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 RPTORQ8N122 1335 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 HOOK2Q96ED9 719 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 CDK5RAP2Q96SN8 1893 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 CEP126Q9P2H0 1117 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 RPS6KL1Q9Y6S9 549 aa8.67□□□□□ -1.02
RPUSD3-212ENST00000466141 CXCL11O14625 94 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 RAB11FIP3O75154 756 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 SLC5A1P13866 664 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 ATP8B2P98198 1209 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 ATP2B3Q16720 1220 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 CCDC84Q86UT8 332 aaPredicted RBP8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 TBC1D22AQ8WUA7 517 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 FAM151AQ8WW52 585 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 PRDM6Q9NQX0 595 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 ZHX2Q9Y6X8 837 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
RPUSD3-212ENST00000466141 DOCK3Q8IZD9 2030 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 PFASO15067 1338 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 IFIT1P09914 478 aaKnown RBP8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 PTPRAP18433 802 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 ADORA1P30542 326 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 MDM2Q00987 491 aaPredicted RBP8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 CDC42EP5Q6NZY7 148 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 GIMAP6Q6P9H5 292 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 ZNF662Q6ZS27 426 aa8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
RPUSD3-212ENST00000466141 SIRT2Q8IXJ6 389 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms