RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 LPAR1Q92633 364 aa10.44□□□□□ -0.74
DDR1-242ENST00000465966 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.74
DDR1-242ENST00000465966 DDX20Q9UHI6 824 aaKnown RBP10.44□□□□□ -0.74
DDR1-242ENST00000465966 DOCK1Q14185 1865 aa10.44□□□□□ -0.74
DDR1-242ENST00000465966 LAMA3Q16787 3333 aa10.44□□□□□ -0.74
DDR1-242ENST00000465966 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
DDR1-242ENST00000465966 COL6A3P12111 3177 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 PNMA6EA0A0J9YXQ4 647 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L15C9J2P7 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L13C9JLJ4 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L11C9JVI0 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L18D6R9N7 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L22D6RA61 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L17D6RBQ6 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L19D6RCP7 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L20D6RJB6 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP14P54578 494 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 USP17L24Q0WX57 530 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 G3BP1Q13283 466 aaKnown RBP eCLIP10.43□□□□□ -0.74
DDR1-242ENST00000465966 METTL16Q86W50 562 aaKnown RBP10.43□□□□□ -0.74
DDR1-242ENST00000465966 MAPKAPK5Q8IW41 473 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 ARRDC4Q8NCT1 418 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 MAFAQ8NHW3 353 aaPredicted RBP10.43□□□□□ -0.74
DDR1-242ENST00000465966 SYMPKQ92797 1274 aaKnown RBP10.43□□□□□ -0.74
DDR1-242ENST00000465966 CDX2Q99626 313 aaPredicted RBP10.43□□□□□ -0.74
DDR1-242ENST00000465966 FEZ1Q99689 392 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 EMILIN3Q9NT22 766 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
DDR1-242ENST00000465966 DDX60LQ5H9U9 1706 aaKnown RBP10.42□□□□□ -0.74
DDR1-242ENST00000465966 FLT1P17948 1338 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 IGSF3O75054 1194 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 PTPREP23469 700 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 PDE4AP27815 886 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 MCAMP43121 646 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 RTP1P59025 263 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 PPP4CP60510 307 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 NUCB1Q02818 461 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 SEMA6BQ9H3T3 888 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 ATP11BQ9Y2G3 1177 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
DDR1-242ENST00000465966 KBTBD13C9JR72 458 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 HMMRO75330 724 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 GH2P01242 217 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 HOXC6P09630 235 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 JAG1P78504 1218 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 ATP8B2P98198 1209 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 MTX1Q13505 466 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 POLA2Q14181 598 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 ZYXQ15942 572 aaKnown RBP10.41□□□□□ -0.74
DDR1-242ENST00000465966 CCDC158Q5M9N0 1113 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 TTC39AQ5SRH9 613 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 DPP9Q86TI2 863 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 C12orf42Q96LP6 360 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 DCTPP1Q9H773 170 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 DNAJC18Q9H819 358 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
DDR1-242ENST00000465966 PRDM5Q9NQX1 630 aaPredicted RBP10.41□□□□□ -0.74
DDR1-242ENST00000465966 LOC285556D6RIA3 1793 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 CYP2C19P33261 490 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SMAD3P84022 425 aaKnown RBP10.4□□□□□ -0.74
DDR1-242ENST00000465966 GRB14Q14449 540 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SHHQ15465 462 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SLC39A5Q6ZMH5 540 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 CATSPERGQ6ZRH7 1159 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 CERS3Q8IU89 383 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SSH3Q8TE77 659 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SLC5A4Q9NY91 659 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 FLRT1Q9NZU1 646 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 SAP30BPQ9UHR5 308 aaKnown RBP10.4□□□□□ -0.74
DDR1-242ENST00000465966 MYH2Q9UKX2 1941 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 MYH13Q9UKX3 1938 aa10.4□□□□□ -0.74
DDR1-242ENST00000465966 PHIPQ8WWQ0 1821 aa10.4□□□□□ -0.75
DDR1-242ENST00000465966 CUL9Q8IWT3 2517 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 STRNO43815 780 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 CNMDO75829 334 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
DDR1-242ENST00000465966 FOSL2P15408 326 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 USP5P45974 858 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
DDR1-242ENST00000465966 CERKLQ49MI3 558 aaPredicted RBP10.39□□□□□ -0.75
DDR1-242ENST00000465966 GJC2Q5T442 439 aaPredicted RBP10.39□□□□□ -0.75
DDR1-242ENST00000465966 POTEEQ6S8J3 1075 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 CHD1LQ86WJ1 897 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 BADQ92934 168 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 LNPKQ9C0E8 428 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 KIAA1683Q9H0B3 1180 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 TSHZ2Q9NRE2 1034 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 SNRKQ9NRH2 765 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 EXOC6BQ9Y2D4 811 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
DDR1-242ENST00000465966 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
DDR1-242ENST00000465966 TMEM265A0A087WTH1 108 aa10.38□□□□□ -0.75
DDR1-242ENST00000465966 CYBAP13498 195 aa10.38□□□□□ -0.75
DDR1-242ENST00000465966 VCAM1P19320 739 aa10.38□□□□□ -0.75
DDR1-242ENST00000465966 ABCB5Q2M3G0 1257 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms