RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 DBNLQ9UJU6 430 aaKnown RBP12.63□□□□□ -0.39
GPNMB-206ENST00000465673 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
GPNMB-206ENST00000465673 IDH1O75874 414 aaKnown RBP12.62□□□□□ -0.39
GPNMB-206ENST00000465673 HLA-DOAP06340 250 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 CNGA1P29973 690 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 CYP2C19P33261 490 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 POLA2Q14181 598 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 TRPV1Q8NER1 839 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 FEZ1Q99689 392 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 GPR108Q9NPR9 543 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
GPNMB-206ENST00000465673 MAST2Q6P0Q8 1798 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L15C9J2P7 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L13C9JLJ4 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L11C9JVI0 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L18D6R9N7 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L22D6RA61 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L17D6RBQ6 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L19D6RCP7 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L20D6RJB6 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
GPNMB-206ENST00000465673 VCAM1P19320 739 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 PTPREP23469 700 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP5P45974 858 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 PLCD1P51178 756 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 USP17L24Q0WX57 530 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 ANO1Q5XXA6 986 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 CATSPERGQ6ZRH7 1159 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 MAGEB6Q8N7X4 407 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 EAF2Q96CJ1 260 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-206ENST00000465673 C12orf42Q96LP6 360 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 COL25A1Q9BXS0 654 aaPredicted RBP12.61□□□□□ -0.39
GPNMB-206ENST00000465673 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
GPNMB-206ENST00000465673 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 GUCY1A2P33402 732 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 CERKLQ49MI3 558 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 GJC2Q5T442 439 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 RPAP3Q9H6T3 665 aaPredicted RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 DDX20Q9UHI6 824 aaKnown RBP12.6□□□□□ -0.39
GPNMB-206ENST00000465673 SERPINB13Q9UIV8 391 aa12.6□□□□□ -0.39
GPNMB-206ENST00000465673 UNC80Q8N2C7 3258 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 SLC15A5A6NIM6 579 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
GPNMB-206ENST00000465673 SHMT1P34896 483 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 CCNA1P78396 465 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 ABCB5Q2M3G0 1257 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 LBHD1Q9BQE6 289 aaPredicted RBP12.59□□□□□ -0.39
GPNMB-206ENST00000465673 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
GPNMB-206ENST00000465673 FRMPD3Q5JV73 1810 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 GLRX3O76003 335 aaKnown RBP12.58□□□□□ -0.4
GPNMB-206ENST00000465673 MYCNP04198 464 aaPredicted RBP12.58□□□□□ -0.4
GPNMB-206ENST00000465673 RTP1P59025 263 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 GRB14Q14449 540 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 SEPT2Q15019 361 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 DNAH12Q6ZR08 3092 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 LPAR1Q92633 364 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 ATP11BQ9Y2G3 1177 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 MYH1P12882 1939 aa12.58□□□□□ -0.4
GPNMB-206ENST00000465673 IGHA2P01877 340 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 HOXC6P09630 235 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 USP14P54578 494 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 SHHQ15465 462 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 C9orf50Q5SZB4 431 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.57□□□□□ -0.4
GPNMB-206ENST00000465673 RIOK1Q9BRS2 568 aaKnown RBP12.57□□□□□ -0.4
GPNMB-206ENST00000465673 MOV10L1Q9BXT6 1211 aaKnown RBP12.57□□□□□ -0.4
GPNMB-206ENST00000465673 EHD4Q9H223 541 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 NOP58Q9Y2X3 529 aaKnown RBP12.57□□□□□ -0.4
GPNMB-206ENST00000465673 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
GPNMB-206ENST00000465673 LAMA2P24043 3122 aaKnown RBP12.57□□□□□ -0.4
GPNMB-206ENST00000465673 DNM1LO00429 736 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 COBLO75128 1261 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 CYP2D6P10635 497 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 RLBP1P12271 317 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 CYBAP13498 195 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 ADORA2AP29274 412 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 LBX2Q6XYB7 198 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 TTC6Q86TZ1 520 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 SLC44A5Q8NCS7 719 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
GPNMB-206ENST00000465673 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-206ENST00000465673 SMIM22K7EJ46 135 aa12.55□□□□□ -0.4
GPNMB-206ENST00000465673 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
GPNMB-206ENST00000465673 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms