RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 ANKRD23Q86SG2 305 aa14.72□□□□□ -0.05
CHPF2-202ENST00000465601 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
CHPF2-202ENST00000465601 DSCC1Q9BVC3 393 aa14.72□□□□□ -0.05
CHPF2-202ENST00000465601 ZNF287Q9HBT7 754 aa14.72□□□□□ -0.05
CHPF2-202ENST00000465601 ANAPC4Q9UJX5 808 aa14.72□□□□□ -0.05
CHPF2-202ENST00000465601 C19orf81C9J6K1 198 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 PTH1RQ03431 593 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 ZYXQ15942 572 aaKnown RBP14.71□□□□□ -0.05
CHPF2-202ENST00000465601 SH3D19Q5HYK7 790 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 TREML2Q5T2D2 321 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 SIAH1Q8IUQ4 282 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 FEZ1Q99689 392 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHPF2-202ENST00000465601 ZCCHC17Q9NP64 241 aaKnown RBP14.71□□□□□ -0.05
CHPF2-202ENST00000465601 TMOD4Q9NZQ9 345 aa14.71□□□□□ -0.05
CHPF2-202ENST00000465601 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHPF2-202ENST00000465601 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 ICA1Q05084 483 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 PROCA1Q8NCQ7 364 aaPredicted RBP14.7□□□□□ -0.06
CHPF2-202ENST00000465601 ESYT1Q9BSJ8 1104 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 CFHR5Q9BXR6 569 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 KANSL2Q9H9L4 492 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 ZFYVE28Q9HCC9 887 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 EMILIN3Q9NT22 766 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 AGTPBP1Q9UPW5 1226 aa14.7□□□□□ -0.06
CHPF2-202ENST00000465601 GREB1LQ9C091 1923 aaPredicted RBP14.69□□□□□ -0.06
CHPF2-202ENST00000465601 MYH4Q9Y623 1939 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 GPR25O00155 361 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 ZNF213O14771 459 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 CYP2C8P10632 490 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
CHPF2-202ENST00000465601 TFAP4Q01664 338 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 ATP2B2Q01814 1243 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
CHPF2-202ENST00000465601 NBPF3Q9H094 633 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 KIAA1683Q9H0B3 1180 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 PRDM10Q9NQV6 1147 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 TOMM22Q9NS69 142 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 CTNNA3Q9UI47 895 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 LOC285556D6RIA3 1793 aa14.69□□□□□ -0.06
CHPF2-202ENST00000465601 ORC4O43929 436 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 RANBP6O60518 1105 aaKnown RBP14.68□□□□□ -0.06
CHPF2-202ENST00000465601 CDC45O75419 566 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 FGRP09769 529 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 USP14P54578 494 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 IMMTQ16891 758 aaKnown RBP14.68□□□□□ -0.06
CHPF2-202ENST00000465601 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 MFSD6Q6ZSS7 791 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 TBC1D10CQ8IV04 446 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 ARHGEF10LQ9HCE6 1279 aa14.68□□□□□ -0.06
CHPF2-202ENST00000465601 LAMA4Q16363 1823 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 TSPY2A6NKD2 308 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 TLR2O60603 784 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 ZNF296Q8WUU4 475 aaPredicted RBP14.67□□□□□ -0.06
CHPF2-202ENST00000465601 STAG1Q8WVM7 1258 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 PARK7Q99497 189 aaKnown RBP14.67□□□□□ -0.06
CHPF2-202ENST00000465601 CPA4Q9UI42 421 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 SLC45A1Q9Y2W3 748 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 TMX2Q9Y320 296 aa14.67□□□□□ -0.06
CHPF2-202ENST00000465601 DOCK3Q8IZD9 2030 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 FKTNO75072 461 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 OSBPP22059 807 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 PABPC4Q13310 644 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHPF2-202ENST00000465601 KIAA1755Q5JYT7 1200 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 CASC1Q6TDU7 716 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 NKX2-3Q8TAU0 364 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 MAP4K1Q92918 833 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 CEP95Q96GE4 821 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 C12orf42Q96LP6 360 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 ASCC2Q9H1I8 757 aaPredicted RBP14.66□□□□□ -0.06
CHPF2-202ENST00000465601 RNF41Q9H4P4 317 aaPredicted RBP14.66□□□□□ -0.06
CHPF2-202ENST00000465601 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 NYAP2Q9P242 653 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
CHPF2-202ENST00000465601 U3KPZ7 1027 aaPredicted RBP14.66□□□□□ -0.06
CHPF2-202ENST00000465601 NMT2O60551 498 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 VCAM1P19320 739 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 HOXA7P31268 230 aaPredicted RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 COL13A1Q5TAT6 717 aaPredicted RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 C17orf99Q6UX52 265 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 SPICE1Q8N0Z3 855 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 LSG1Q9H089 658 aaKnown RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 ANO2Q9NQ90 1003 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 IL17RBQ9NRM6 502 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 PNMA3Q9UL41 463 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 RBM8AQ9Y5S9 174 aaKnown RBP14.65□□□□□ -0.06
CHPF2-202ENST00000465601 NEDD4P46934 1319 aa14.65□□□□□ -0.06
CHPF2-202ENST00000465601 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms