RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 GJB2P29033 226 aa25.37■■□□□ 1.65
ITGA4-204ENST00000465522 MIGA2Q7L4E1 593 aa25.37■■□□□ 1.65
ITGA4-204ENST00000465522 CIZ1Q9ULV3 898 aaPredicted RBP25.37■■□□□ 1.65
ITGA4-204ENST00000465522 MTMR4Q9NYA4 1195 aa25.36■■□□□ 1.65
ITGA4-204ENST00000465522 CALM1P0DP23 149 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 CALM2P0DP24 149 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 CALM3P0DP25 149 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 EPHX2P34913 555 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 ADD1P35611 737 aaKnown RBP25.35■■□□□ 1.65
ITGA4-204ENST00000465522 ABCB5Q2M3G0 1257 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 FANCBQ8NB91 859 aa25.35■■□□□ 1.65
ITGA4-204ENST00000465522 IGKV6D-41A0A0C4DH26 115 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 CTDNEP1O95476 244 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 CDC27P30260 824 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 MAP3K10Q02779 954 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 TROAPQ12815 778 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 USP50Q70EL3 339 aaPredicted RBP25.34■■□□□ 1.65
ITGA4-204ENST00000465522 PNMA1Q8ND90 353 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 NSUN7Q8NE18 718 aaKnown RBP25.34■■□□□ 1.65
ITGA4-204ENST00000465522 TMEM47Q9BQJ4 181 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 CABP5Q9NP86 173 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 PITPNM2Q9BZ72 1349 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 CCDC196A0A1B0GTZ2 297 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 IQCA1LA6NCM1 817 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 DDAH1O94760 285 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 GDF11O95390 407 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 PPP2R5BQ15173 497 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 RTN1Q16799 776 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 PPP4R3BQ5MIZ7 849 aa25.34■■□□□ 1.65
ITGA4-204ENST00000465522 CPLX2Q6PUV4 134 aaKnown RBP25.34■■□□□ 1.65
ITGA4-204ENST00000465522 JAK2O60674 1132 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 TTLL1O95922 423 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 TOP1P11387 765 aaKnown RBP25.33■■□□□ 1.65
ITGA4-204ENST00000465522 NOVP48745 357 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 TMEM179Q6ZVK1 233 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 SMARCC2Q8TAQ2 1214 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 DCPSQ96C86 337 aaKnown RBP25.33■■□□□ 1.65
ITGA4-204ENST00000465522 FAM217BQ9NTX9 383 aaPredicted RBP25.33■■□□□ 1.65
ITGA4-204ENST00000465522 PPP2R3BQ9Y5P8 575 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 SCN4AP35499 1836 aa25.33■■□□□ 1.65
ITGA4-204ENST00000465522 NID2Q14112 1375 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 NBPF12Q5TAG4 269 aaPredicted RBP25.32■■□□□ 1.64
ITGA4-204ENST00000465522 CLIP2Q9UDT6 1046 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 PTPDC1A2A3K4 754 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 HMGN5P82970 282 aaKnown RBP25.32■■□□□ 1.64
ITGA4-204ENST00000465522 RRP1BQ14684 758 aaKnown RBP25.32■■□□□ 1.64
ITGA4-204ENST00000465522 HOOK2Q96ED9 719 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 DDX11Q96FC9 970 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 KANSL2Q9H9L4 492 aa25.32■■□□□ 1.64
ITGA4-204ENST00000465522 GREB1LQ9C091 1923 aaPredicted RBP25.31■■□□□ 1.64
ITGA4-204ENST00000465522 CDKL5O76039 1030 aa25.31■■□□□ 1.64
ITGA4-204ENST00000465522 GH2P01242 217 aa25.31■■□□□ 1.64
ITGA4-204ENST00000465522 NUCB2P80303 420 aa25.31■■□□□ 1.64
ITGA4-204ENST00000465522 SHROOM1Q2M3G4 852 aaPredicted RBP25.31■■□□□ 1.64
ITGA4-204ENST00000465522 CTCFLQ8NI51 663 aaPredicted RBP25.31■■□□□ 1.64
ITGA4-204ENST00000465522 ATP2B2Q01814 1243 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 SEPT2Q15019 361 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 PRAMEF18Q5VWM3 479 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 CLEC10AQ8IUN9 316 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 FAM184AQ8NB25 1140 aa25.3■■□□□ 1.64
ITGA4-204ENST00000465522 TAF1DQ9H5J8 278 aaPredicted RBP25.3■■□□□ 1.64
ITGA4-204ENST00000465522 RBM28Q9NW13 759 aaKnown RBP25.3■■□□□ 1.64
ITGA4-204ENST00000465522 PPFIA3O75145 1194 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 SULF1Q8IWU6 871 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 ZC3H15Q8WU90 426 aaKnown RBP25.29■■□□□ 1.64
ITGA4-204ENST00000465522 MAP3K14Q99558 947 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 POTECB2RU33 542 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 NTRK3Q16288 839 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 DCAF15Q66K64 600 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 MTMR7Q9Y216 660 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 KIF3AQ9Y496 699 aa25.29■■□□□ 1.64
ITGA4-204ENST00000465522 MYH4Q9Y623 1939 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 PDCP20941 246 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 KIF5BP33176 963 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 CAP2P40123 477 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 JAG1P78504 1218 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 SUPT20HL1Q3ZLR7 823 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 EAPPQ56P03 285 aaPredicted RBP25.28■■□□□ 1.64
ITGA4-204ENST00000465522 LARP1BQ659C4 914 aaKnown RBP25.28■■□□□ 1.64
ITGA4-204ENST00000465522 PNMA8AQ86V59 439 aaPredicted RBP25.28■■□□□ 1.64
ITGA4-204ENST00000465522 NYAP2Q9P242 653 aa25.28■■□□□ 1.64
ITGA4-204ENST00000465522 IFNAR1P17181 557 aa25.27■■□□□ 1.64
ITGA4-204ENST00000465522 SYT1P21579 422 aa25.27■■□□□ 1.64
ITGA4-204ENST00000465522 ICA1Q05084 483 aa25.27■■□□□ 1.64
ITGA4-204ENST00000465522 WDR90Q96KV7 1748 aa25.27■■□□□ 1.64
ITGA4-204ENST00000465522 PHF20L1A8MW92 1017 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 EEF2P13639 858 aaKnown RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 PKP1Q13835 747 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 LRRC47Q8N1G4 583 aaKnown RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 CCDC82Q8N4S0 544 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 PHKBQ93100 1093 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 MKL1Q969V6 931 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 ORC3Q9UBD5 711 aaPredicted RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 PDIA4P13667 645 aaKnown RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 SSRP1Q08945 709 aaKnown RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 KRT26Q7Z3Y9 468 aa25.26■■□□□ 1.63
ITGA4-204ENST00000465522 CMTR1Q8N1G2 835 aaKnown RBP25.26■■□□□ 1.63
ITGA4-204ENST00000465522 ZNF341Q9BYN7 854 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms