RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CTDSPL2Q05D32 466 aa24.17■■□□□ 1.46
SKA3-205ENST00000465471 PDE4BQ07343 736 aa24.17■■□□□ 1.46
SKA3-205ENST00000465471 NOM1Q5C9Z4 860 aaKnown RBP24.17■■□□□ 1.46
SKA3-205ENST00000465471 STK11IPQ8N1F8 1099 aa24.17■■□□□ 1.46
SKA3-205ENST00000465471 R3HDMLQ9H3Y0 253 aa24.17■■□□□ 1.46
SKA3-205ENST00000465471 SLC45A1Q9Y2W3 748 aa24.17■■□□□ 1.46
SKA3-205ENST00000465471 C19orf81C9J6K1 198 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 PRDM1O75626 825 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 CRHR2Q13324 411 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 SIAH1Q8IUQ4 282 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 ACER1Q8TDN7 264 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 C12orf42Q96LP6 360 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 KIAA1683Q9H0B3 1180 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 AGTPBP1Q9UPW5 1226 aa24.16■■□□□ 1.46
SKA3-205ENST00000465471 IGKV6D-41A0A0C4DH26 115 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 PDHXO00330 501 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 ORC4O43929 436 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 TBC1D8O95759 1140 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 LBX1P52954 281 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 DGKZQ13574 1117 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 GADL1Q6ZQY3 521 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 CLEC10AQ8IUN9 316 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 ESYT1Q9BSJ8 1104 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 PRDM10Q9NQV6 1147 aa24.15■■□□□ 1.46
SKA3-205ENST00000465471 ADGRA2Q96PE1 1338 aa24.14■■□□□ 1.46
SKA3-205ENST00000465471 A0A1W2PRG0 241 aa24.14■■□□□ 1.45
SKA3-205ENST00000465471 ICA1Q05084 483 aa24.14■■□□□ 1.45
SKA3-205ENST00000465471 TAF1CQ15572 869 aaPredicted RBP24.14■■□□□ 1.45
SKA3-205ENST00000465471 TREML2Q5T2D2 321 aa24.14■■□□□ 1.45
SKA3-205ENST00000465471 KANSL2Q9H9L4 492 aa24.14■■□□□ 1.45
SKA3-205ENST00000465471 EMILIN3Q9NT22 766 aa24.14■■□□□ 1.45
SKA3-205ENST00000465471 CDC45O75419 566 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 HAND2P61296 217 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 PTH1RQ03431 593 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 USP17L2Q6R6M4 530 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 TBC1D10CQ8IV04 446 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 ZNF444Q8N0Y2 327 aaPredicted RBP24.13■■□□□ 1.45
SKA3-205ENST00000465471 STAG1Q8WVM7 1258 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 INCENPQ9NQS7 918 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 CTNNA3Q9UI47 895 aa24.13■■□□□ 1.45
SKA3-205ENST00000465471 PCP11498 1178 aaKnown RBP24.12■■□□□ 1.45
SKA3-205ENST00000465471 NEDD1Q8NHV4 660 aa24.12■■□□□ 1.45
SKA3-205ENST00000465471 GPR25O00155 361 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 ZNF213O14771 459 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 USP14P54578 494 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 AKNAD1Q5T1N1 836 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 FEZ1Q99689 392 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 ZFYVE28Q9HCC9 887 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 TMOD4Q9NZQ9 345 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 TMX2Q9Y320 296 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 CASP8AP2Q9UKL3 1982 aa24.11■■□□□ 1.45
SKA3-205ENST00000465471 MYH4Q9Y623 1939 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 TLR2O60603 784 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 EEF2P13639 858 aaKnown RBP24.1■■□□□ 1.45
SKA3-205ENST00000465471 HOXA7P31268 230 aaPredicted RBP24.1■■□□□ 1.45
SKA3-205ENST00000465471 FAM47AQ5JRC9 791 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 MAP4K1Q92918 833 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 PARK7Q99497 189 aaKnown RBP24.1■■□□□ 1.45
SKA3-205ENST00000465471 LSG1Q9H089 658 aaKnown RBP24.1■■□□□ 1.45
SKA3-205ENST00000465471 ARHGEF10LQ9HCE6 1279 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 NYAP2Q9P242 653 aa24.1■■□□□ 1.45
SKA3-205ENST00000465471 TSPY3P0CV98 308 aa24.09■■□□□ 1.45
SKA3-205ENST00000465471 TSPY8P0CW00 308 aa24.09■■□□□ 1.45
SKA3-205ENST00000465471 TFAP4Q01664 338 aa24.09■■□□□ 1.45
SKA3-205ENST00000465471 IMMTQ16891 758 aaKnown RBP24.09■■□□□ 1.45
SKA3-205ENST00000465471 MTMR4Q9NYA4 1195 aa24.09■■□□□ 1.45
SKA3-205ENST00000465471 NEDD4P46934 1319 aa24.09■■□□□ 1.45
SKA3-205ENST00000465471 CYP2C8P10632 490 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 VCAM1P19320 739 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 NT5C2P49902 561 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 PABPC4Q13310 644 aaKnown RBP eCLIP24.08■■□□□ 1.45
SKA3-205ENST00000465471 ZYXQ15942 572 aaKnown RBP24.08■■□□□ 1.45
SKA3-205ENST00000465471 MFSD6Q6ZSS7 791 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 CEP95Q96GE4 821 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 RNF41Q9H4P4 317 aaPredicted RBP24.08■■□□□ 1.45
SKA3-205ENST00000465471 SH2D4AQ9H788 454 aa24.08■■□□□ 1.45
SKA3-205ENST00000465471 U3KPZ7 1027 aaPredicted RBP24.08■■□□□ 1.45
SKA3-205ENST00000465471 NOVP48745 357 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 KIAA1755Q5JYT7 1200 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 C17orf99Q6UX52 265 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 NKX2-3Q8TAU0 364 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 ZNF296Q8WUU4 475 aaPredicted RBP24.07■■□□□ 1.44
SKA3-205ENST00000465471 VCPKMTQ9H867 229 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 PNMA3Q9UL41 463 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 SYNPO2Q9UMS6 1093 aa24.07■■□□□ 1.44
SKA3-205ENST00000465471 TSPY2A6NKD2 308 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 LPAR1Q92633 364 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 MKL1Q969V6 931 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 ASCC2Q9H1I8 757 aaPredicted RBP24.06■■□□□ 1.44
SKA3-205ENST00000465471 IL17RBQ9NRM6 502 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 RLFQ13129 1914 aa24.06■■□□□ 1.44
SKA3-205ENST00000465471 RANBP6O60518 1105 aaKnown RBP24.05■■□□□ 1.44
SKA3-205ENST00000465471 CYP21A2P08686 494 aa24.05■■□□□ 1.44
SKA3-205ENST00000465471 TCP11L1Q9NUJ3 509 aa24.05■■□□□ 1.44
SKA3-205ENST00000465471 RBM8AQ9Y5S9 174 aaKnown RBP24.05■■□□□ 1.44
SKA3-205ENST00000465471 PARP14Q460N5 1801 aa24.05■■□□□ 1.44
SKA3-205ENST00000465471 FKTNO75072 461 aa24.04■■□□□ 1.44
SKA3-205ENST00000465471 TTLL1O95922 423 aa24.04■■□□□ 1.44
SKA3-205ENST00000465471 BCRP11274 1271 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms