RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 USP17L13C9JLJ4 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L11C9JVI0 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L18D6R9N7 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L22D6RA61 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L17D6RBQ6 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L19D6RCP7 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L20D6RJB6 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 GUCY1A2P33402 732 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP14P54578 494 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 USP17L24Q0WX57 530 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 SLFNL1Q499Z3 407 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 LCORLQ8N3X6 602 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 GTF3C2Q8WUA4 911 aaPredicted RBP25.26■■□□□ 1.63
CSPG5-204ENST00000465441 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 KIAA1683Q9H0B3 1180 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 PORCNQ9H237 461 aa25.26■■□□□ 1.63
CSPG5-204ENST00000465441 ATP5JP18859 108 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 MAPK4P31152 587 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 CATSPERGQ6ZRH7 1159 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 TRIB2Q92519 343 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 HMX1Q9NP08 348 aaPredicted RBP25.25■■□□□ 1.63
CSPG5-204ENST00000465441 DCP1AQ9NPI6 582 aaPredicted RBP25.25■■□□□ 1.63
CSPG5-204ENST00000465441 PAG1Q9NWQ8 432 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 RPTORQ8N122 1335 aa25.25■■□□□ 1.63
CSPG5-204ENST00000465441 CCAR1Q8IX12 1150 aaKnown RBP25.24■■□□□ 1.63
CSPG5-204ENST00000465441 PAWRQ96IZ0 340 aaKnown RBP25.24■■□□□ 1.63
CSPG5-204ENST00000465441 ARMT1Q9H993 441 aa25.24■■□□□ 1.63
CSPG5-204ENST00000465441 PLXNB2O15031 1838 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 CNMDO75829 334 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 ADD2P35612 726 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 FXR1P51114 621 aaKnown RBP eCLIP25.23■■□□□ 1.63
CSPG5-204ENST00000465441 PDE3AQ14432 1141 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 SEPT2Q15019 361 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 CHRDL2Q6WN34 429 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 GPR142Q7Z601 462 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 RABGAP1Q9Y3P9 1069 aa25.23■■□□□ 1.63
CSPG5-204ENST00000465441 PRKAB2O43741 272 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 CYP2D6P10635 497 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 XRCC5P13010 732 aaKnown RBP25.22■■□□□ 1.63
CSPG5-204ENST00000465441 PLEKHH3Q7Z736 793 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 SOCS4Q8WXH5 440 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 USP6NLQ92738 828 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 HAUS7Q99871 368 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 NR2E3Q9Y5X4 410 aa25.22■■□□□ 1.63
CSPG5-204ENST00000465441 VCAM1P19320 739 aa25.21■■□□□ 1.63
CSPG5-204ENST00000465441 MORN1Q5T089 497 aa25.21■■□□□ 1.63
CSPG5-204ENST00000465441 A0A1W2PRG0 241 aa25.2■■□□□ 1.62
CSPG5-204ENST00000465441 MPHOSPH10O00566 681 aaKnown RBP25.2■■□□□ 1.62
CSPG5-204ENST00000465441 SMARCA5O60264 1052 aaPredicted RBP25.2■■□□□ 1.62
CSPG5-204ENST00000465441 CHGBP05060 677 aa25.2■■□□□ 1.62
CSPG5-204ENST00000465441 MAP3K21Q5TCX8 1036 aa25.2■■□□□ 1.62
CSPG5-204ENST00000465441 NECAB2Q7Z6G3 386 aa25.2■■□□□ 1.62
CSPG5-204ENST00000465441 DIS3LQ8TF46 1054 aaKnown RBP25.2■■□□□ 1.62
CSPG5-204ENST00000465441 LRRCC1Q9C099 1032 aa25.2■■□□□ 1.62
CSPG5-204ENST00000465441 RPAP3Q9H6T3 665 aaPredicted RBP25.2■■□□□ 1.62
CSPG5-204ENST00000465441 MBD4O95243 580 aa25.19■■□□□ 1.62
CSPG5-204ENST00000465441 TRMT44Q8IYL2 757 aaKnown RBP25.19■■□□□ 1.62
CSPG5-204ENST00000465441 ANKLE1Q8NAG6 615 aa25.19■■□□□ 1.62
CSPG5-204ENST00000465441 SLC44A5Q8NCS7 719 aa25.19■■□□□ 1.62
CSPG5-204ENST00000465441 DYNLL2Q96FJ2 89 aa25.19■■□□□ 1.62
CSPG5-204ENST00000465441 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.19■■□□□ 1.62
CSPG5-204ENST00000465441 RBM27Q9P2N5 1060 aaKnown RBP25.19■■□□□ 1.62
CSPG5-204ENST00000465441 EVI5O60447 810 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 PRKAR2AP13861 404 aaKnown RBP25.18■■□□□ 1.62
CSPG5-204ENST00000465441 RGS2P41220 211 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 CCL14Q16627 93 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 ATP8A2Q9NTI2 1148 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 BTBD7Q9P203 1132 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 SWAP70Q9UH65 585 aa25.18■■□□□ 1.62
CSPG5-204ENST00000465441 CCNA1P78396 465 aa25.17■■□□□ 1.62
CSPG5-204ENST00000465441 CACNB2Q08289 660 aaPredicted RBP25.17■■□□□ 1.62
CSPG5-204ENST00000465441 UBE3CQ15386 1083 aa25.17■■□□□ 1.62
CSPG5-204ENST00000465441 CWC22Q9HCG8 908 aaKnown RBP25.17■■□□□ 1.62
CSPG5-204ENST00000465441 OGDHLQ9ULD0 1010 aa25.17■■□□□ 1.62
CSPG5-204ENST00000465441 DDX60LQ5H9U9 1706 aaKnown RBP25.17■■□□□ 1.62
CSPG5-204ENST00000465441 NAV1Q8NEY1 1877 aa25.17■■□□□ 1.62
CSPG5-204ENST00000465441 SPDYE16A6NNV3 312 aaPredicted RBP25.16■■□□□ 1.62
CSPG5-204ENST00000465441 SMIM22K7EJ46 135 aa25.16■■□□□ 1.62
CSPG5-204ENST00000465441 ZKSCAN1P17029 563 aaPredicted RBP25.16■■□□□ 1.62
CSPG5-204ENST00000465441 MNX1P50219 401 aaPredicted RBP25.16■■□□□ 1.62
CSPG5-204ENST00000465441 PTPREP23469 700 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 MAP2K5Q13163 448 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 COG2Q14746 738 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 C12orf60Q5U649 245 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 TMEM179Q6ZVK1 233 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 SIAH1Q8IUQ4 282 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 PRO3102Q9H379 93 aa25.15■■□□□ 1.62
CSPG5-204ENST00000465441 CYP2D7A0A087X1C5 515 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 USP17L12C9JPN9 530 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 USP17L21D6R901 530 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 GLRX3O76003 335 aaKnown RBP25.14■■□□□ 1.62
CSPG5-204ENST00000465441 AKR1B1P15121 316 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 KIAA1755Q5JYT7 1200 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 WDR78Q5VTH9 848 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 NBPF3Q9H094 633 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 HOXC10Q9NYD6 342 aa25.14■■□□□ 1.62
CSPG5-204ENST00000465441 CCND3P30281 292 aaPredicted RBP25.13■■□□□ 1.61
CSPG5-204ENST00000465441 CDK8P49336 464 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms