RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 GRB14Q14449 540 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 MAPKAPK5Q8IW41 473 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 ARRDC4Q8NCT1 418 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 TIFAQ96CG3 184 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 THEGQ9P2T0 379 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 PI4KBQ9UBF8 816 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 RABGAP1Q9Y3P9 1069 aa18.54■□□□□ 0.56
HDAC6-214ENST00000465269 TCF20Q9UGU0 1960 aaKnown RBP18.53■□□□□ 0.56
HDAC6-214ENST00000465269 IGHA2P01877 340 aa18.53■□□□□ 0.56
HDAC6-214ENST00000465269 HOXC6P09630 235 aa18.53■□□□□ 0.56
HDAC6-214ENST00000465269 LRRC41Q15345 812 aa18.53■□□□□ 0.56
HDAC6-214ENST00000465269 RAI14Q9P0K7 980 aa18.53■□□□□ 0.56
HDAC6-214ENST00000465269 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
HDAC6-214ENST00000465269 GLRX3O76003 335 aaKnown RBP18.52■□□□□ 0.56
HDAC6-214ENST00000465269 ADGRE1Q14246 886 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 FAM47AQ5JRC9 791 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 USP17L2Q6R6M4 530 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 ATXN2LQ8WWM7 1075 aaKnown RBP18.52■□□□□ 0.56
HDAC6-214ENST00000465269 XAGE2Q96GT9 111 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 SAP30BPQ9UHR5 308 aaKnown RBP18.52■□□□□ 0.56
HDAC6-214ENST00000465269 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 IVNS1ABPQ9Y6Y0 642 aa18.52■□□□□ 0.56
HDAC6-214ENST00000465269 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 A0A1B0GUL7 405 aa18.51■□□□□ 0.55
HDAC6-214ENST00000465269 PQBP1O60828 265 aaKnown RBP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 IL15P40933 162 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 CCNA1P78396 465 aa18.51■□□□□ 0.55
HDAC6-214ENST00000465269 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 GTF3C2Q8WUA4 911 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 TGFBRAP1Q8WUH2 860 aa18.51■□□□□ 0.55
HDAC6-214ENST00000465269 AATFQ9NY61 560 aaKnown RBP eCLIP18.51■□□□□ 0.55
HDAC6-214ENST00000465269 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-214ENST00000465269 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-214ENST00000465269 GH2P01242 217 aa18.5■□□□□ 0.55
HDAC6-214ENST00000465269 CLTBP09497 229 aa18.5■□□□□ 0.55
HDAC6-214ENST00000465269 RAG1P15918 1043 aa18.5■□□□□ 0.55
HDAC6-214ENST00000465269 MRPS5P82675 430 aaKnown RBP18.5■□□□□ 0.55
HDAC6-214ENST00000465269 GAS2L1Q99501 681 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L15C9J2P7 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L13C9JLJ4 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L11C9JVI0 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L18D6R9N7 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L22D6RA61 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L17D6RBQ6 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L19D6RCP7 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L20D6RJB6 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 SEPT4O43236 478 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 COBLO75128 1261 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 LDHCP07864 332 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 ADORA2AP29274 412 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 GSTO1P78417 241 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 FPGSQ05932 587 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 USP17L24Q0WX57 530 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 TFCP2Q12800 502 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 CATSPERGQ6ZRH7 1159 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 DPP9Q86TI2 863 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 ACER1Q8TDN7 264 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 FEZ1Q99689 392 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 TACC3Q9Y6A5 838 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 PLXNA1Q9UIW2 1896 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 FLT1P17948 1338 aa18.49■□□□□ 0.55
HDAC6-214ENST00000465269 MUC6Q6W4X9 2439 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 SPDYE16A6NNV3 312 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-214ENST00000465269 KIAA0355O15063 1070 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 IGFBP4P22692 258 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 ADGRA1Q86SQ6 560 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.48■□□□□ 0.552e-7■■■□□ 16.9
HDAC6-214ENST00000465269 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 PBX4Q9BYU1 374 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 SMCHD1A6NHR9 2005 aa18.48■□□□□ 0.55
HDAC6-214ENST00000465269 PGK1P00558 417 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 VCAM1P19320 739 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
HDAC6-214ENST00000465269 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 LENG1Q96BZ8 264 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-214ENST00000465269 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 DHX36Q9H2U1 1008 aaKnown RBP18.47■□□□□ 0.55
HDAC6-214ENST00000465269 TMEM39AQ9NV64 488 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 FBXO3Q9UK99 471 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 TRANK1O15050 2925 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
HDAC6-214ENST00000465269 ZBTB22O15209 634 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
HDAC6-214ENST00000465269 TFF2Q03403 129 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 C1orf53Q5VUE5 145 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 SSH1Q8WYL5 1049 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 C12orf42Q96LP6 360 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
HDAC6-214ENST00000465269 PHF24Q9UPV7 400 aa18.46■□□□□ 0.55
HDAC6-214ENST00000465269 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-214ENST00000465269 MVPQ14764 893 aaKnown RBP18.45■□□□□ 0.54
HDAC6-214ENST00000465269 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 AKNAD1Q5T1N1 836 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 OLFML2BQ68BL8 750 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 IL27Q8NEV9 243 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 EPHX3Q9H6B9 360 aa18.45■□□□□ 0.54
HDAC6-214ENST00000465269 RPAP3Q9H6T3 665 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-214ENST00000465269 SNRKQ9NRH2 765 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms