RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 WDR18Q9BV38 432 aa20.86■□□□□ 0.93
CPSF4-209ENST00000465132 PAK6Q9NQU5 681 aaPredicted RBP20.86■□□□□ 0.93
CPSF4-209ENST00000465132 FLT1P17948 1338 aa20.85■□□□□ 0.93
CPSF4-209ENST00000465132 TFRCP02786 760 aaKnown RBP20.85■□□□□ 0.93
CPSF4-209ENST00000465132 JAG1P78504 1218 aa20.85■□□□□ 0.93
CPSF4-209ENST00000465132 METTL16Q86W50 562 aaKnown RBP20.85■□□□□ 0.93
CPSF4-209ENST00000465132 DEFB118Q96PH6 123 aa20.85■□□□□ 0.93
CPSF4-209ENST00000465132 CRNKL1Q9BZJ0 848 aaKnown RBP20.85■□□□□ 0.93
CPSF4-209ENST00000465132 DNAJC18Q9H819 358 aa20.85■□□□□ 0.93
CPSF4-209ENST00000465132 NR2E3Q9Y5X4 410 aa20.85■□□□□ 0.93
CPSF4-209ENST00000465132 ATAD5Q96QE3 1844 aa20.84■□□□□ 0.93
CPSF4-209ENST00000465132 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
CPSF4-209ENST00000465132 ASNSP08243 561 aa20.84■□□□□ 0.93
CPSF4-209ENST00000465132 BACE1P56817 501 aa20.84■□□□□ 0.93
CPSF4-209ENST00000465132 MTMR2Q13614 643 aa20.84■□□□□ 0.93
CPSF4-209ENST00000465132 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-209ENST00000465132 RBM27Q9P2N5 1060 aaKnown RBP20.84■□□□□ 0.93
CPSF4-209ENST00000465132 SIPA1L1O43166 1804 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 RAD50Q92878 1312 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 CDC45O75419 566 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 MCMDC2Q4G0Z9 681 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 ZMYM1Q5SVZ6 1142 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 CRISPLD2Q9H0B8 497 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 GJD2Q9UKL4 321 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 PALD1Q9ULE6 856 aa20.83■□□□□ 0.93
CPSF4-209ENST00000465132 HOXA7P31268 230 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-209ENST00000465132 AMOTL1Q8IY63 956 aa20.82■□□□□ 0.92
CPSF4-209ENST00000465132 CRACR2BQ8N4Y2 399 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-209ENST00000465132 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
CPSF4-209ENST00000465132 GINM1Q9NU53 330 aa20.82■□□□□ 0.92
CPSF4-209ENST00000465132 TMOD4Q9NZQ9 345 aa20.82■□□□□ 0.92
CPSF4-209ENST00000465132 TRIOBPQ9H2D6 2365 aa20.81■□□□□ 0.92
CPSF4-209ENST00000465132 C19orf81C9J6K1 198 aa20.81■□□□□ 0.92
CPSF4-209ENST00000465132 HMGCRP04035 888 aa20.81■□□□□ 0.92
CPSF4-209ENST00000465132 IRX3P78415 501 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-209ENST00000465132 SHROOM1Q2M3G4 852 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-209ENST00000465132 MIGA1Q8NAN2 632 aa20.81■□□□□ 0.92
CPSF4-209ENST00000465132 NACAP1Q9BZK3 213 aa20.81■□□□□ 0.92
CPSF4-209ENST00000465132 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.81■□□□□ 0.92
CPSF4-209ENST00000465132 DOCK3Q8IZD9 2030 aa20.8■□□□□ 0.92
CPSF4-209ENST00000465132 GDF11O95390 407 aa20.8■□□□□ 0.92
CPSF4-209ENST00000465132 USP5P45974 858 aa20.8■□□□□ 0.92
CPSF4-209ENST00000465132 DYNLL1P63167 89 aaKnown RBP20.8■□□□□ 0.92
CPSF4-209ENST00000465132 P2RX7Q99572 595 aaKnown RBP20.8■□□□□ 0.92
CPSF4-209ENST00000465132 PRO3102Q9H379 93 aa20.8■□□□□ 0.92
CPSF4-209ENST00000465132 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
CPSF4-209ENST00000465132 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
CPSF4-209ENST00000465132 USP17L10C9JJH3 530 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 MBD4O95243 580 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 HLA-DOAP06340 250 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 CHMLP26374 656 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 NMIQ13287 307 aaPredicted RBP20.79■□□□□ 0.92
CPSF4-209ENST00000465132 CWC27Q6UX04 472 aaKnown RBP20.79■□□□□ 0.92
CPSF4-209ENST00000465132 TXNRD2Q9NNW7 524 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 ATP8A2Q9NTI2 1148 aa20.79■□□□□ 0.92
CPSF4-209ENST00000465132 EVI5O60447 810 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 HERVK_113P62684 666 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 TRIM32Q13049 653 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 GIMAP6Q6P9H5 292 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 KIAA1211Q6ZU35 1233 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 SKAP1Q86WV1 359 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 GPRC5AQ8NFJ5 357 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 OSBP2Q969R2 916 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 PAWRQ96IZ0 340 aaKnown RBP20.78■□□□□ 0.92
CPSF4-209ENST00000465132 RIOK1Q9BRS2 568 aaKnown RBP20.78■□□□□ 0.92
CPSF4-209ENST00000465132 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
CPSF4-209ENST00000465132 RPTORQ8N122 1335 aa20.78■□□□□ 0.92
CPSF4-209ENST00000465132 CDK5RAP2Q96SN8 1893 aa20.77■□□□□ 0.92
CPSF4-209ENST00000465132 FOCADQ5VW36 1801 aa20.77■□□□□ 0.92
CPSF4-209ENST00000465132 GPAA1O43292 621 aa20.77■□□□□ 0.92
CPSF4-209ENST00000465132 PEX10O60683 326 aa20.77■□□□□ 0.92
CPSF4-209ENST00000465132 DIS3LQ8TF46 1054 aaKnown RBP20.77■□□□□ 0.92
CPSF4-209ENST00000465132 STRBPQ96SI9 672 aaKnown RBP20.77■□□□□ 0.92
CPSF4-209ENST00000465132 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.92
CPSF4-209ENST00000465132 CCDC171Q6TFL3 1326 aa20.77■□□□□ 0.91
CPSF4-209ENST00000465132 APPP05067 770 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 NECAB2Q7Z6G3 386 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 TRIB2Q92519 343 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 ARMT1Q9H993 441 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-209ENST00000465132 EMILIN3Q9NT22 766 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 RBPJLQ9UBG7 517 aa20.76■□□□□ 0.91
CPSF4-209ENST00000465132 PATL2C9JE40 543 aaKnown RBP20.75■□□□□ 0.91
CPSF4-209ENST00000465132 GH2P01242 217 aa20.75■□□□□ 0.91
CPSF4-209ENST00000465132 CYP2B6P20813 491 aa20.75■□□□□ 0.91
CPSF4-209ENST00000465132 LCORLQ8N3X6 602 aa20.75■□□□□ 0.91
CPSF4-209ENST00000465132 FAM227BQ96M60 508 aa20.75■□□□□ 0.91
CPSF4-209ENST00000465132 A0A0D9SFI3 127 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 XRCC5P13010 732 aaKnown RBP20.74■□□□□ 0.91
CPSF4-209ENST00000465132 MAPK4P31152 587 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 Q3C1V9 767 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 MAP3K21Q5TCX8 1036 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 USP17L2Q6R6M4 530 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 TTC6Q86TZ1 520 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 GTF3C2Q8WUA4 911 aaPredicted RBP20.74■□□□□ 0.91
CPSF4-209ENST00000465132 SOCS4Q8WXH5 440 aa20.74■□□□□ 0.91
CPSF4-209ENST00000465132 NUDT12Q9BQG2 462 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms