RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 SWAP70Q9UH65 585 aa12.74□□□□□ -0.37
TNRC18-209ENST00000464852 SERPINB13Q9UIV8 391 aa12.74□□□□□ -0.37
TNRC18-209ENST00000464852 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
TNRC18-209ENST00000464852 TACC3Q9Y6A5 838 aa12.74□□□□□ -0.37
TNRC18-209ENST00000464852 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 PRC1O43663 620 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 CDK8P49336 464 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 AK2P54819 239 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 GABPAQ06546 454 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 Q6ZUG5 572 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 TMTC2Q8N394 836 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 DYNLL2Q96FJ2 89 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 TMEM87BQ96K49 555 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 ZSCAN31Q96LW9 406 aaPredicted RBP12.73□□□□□ -0.37
TNRC18-209ENST00000464852 AGXT2Q9BYV1 514 aa12.73□□□□□ -0.37
TNRC18-209ENST00000464852 VCANP13611 3396 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 NEDD4P46934 1319 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 K7ELQ4 463 aaPredicted RBP12.72□□□□□ -0.37
TNRC18-209ENST00000464852 FKTNO75072 461 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 PRDM1O75626 825 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 EVX2Q03828 476 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 SLC4A8Q2Y0W8 1093 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 CCDC178Q5BJE1 867 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 CYB5R4Q7L1T6 521 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 SH3BP5LQ7L8J4 393 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 IQCA1Q86XH1 822 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 CRACR2BQ8N4Y2 399 aaPredicted RBP12.72□□□□□ -0.37
TNRC18-209ENST00000464852 TRIM34Q9BYJ4 488 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
TNRC18-209ENST00000464852 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
TNRC18-209ENST00000464852 LAMB1P07942 1786 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 ERICH2A1L162 156 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 IFIT3O14879 490 aaKnown RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 LIFRP42702 1097 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 ANTXR2P58335 489 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 TFAP4Q01664 338 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 RASA3Q14644 834 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 CHST3Q7LGC8 479 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 APOBEC3FQ8IUX4 373 aaKnown RBP12.71□□□□□ -0.37
TNRC18-209ENST00000464852 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 TCEANC2Q96MN5 208 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
TNRC18-209ENST00000464852 TSPY2A6NKD2 308 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TBC1D12O60347 775 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 RASA1P20936 1047 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TM4SF4P48230 202 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 EVCP57679 992 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
TNRC18-209ENST00000464852 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 BRF1Q92994 677 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 ZSCAN10Q96SZ4 725 aaPredicted RBP12.7□□□□□ -0.38
TNRC18-209ENST00000464852 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 LRRC2Q9BYS8 371 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
TNRC18-209ENST00000464852 ANGEL1Q9UNK9 670 aaKnown RBP12.7□□□□□ -0.38
TNRC18-209ENST00000464852 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
TNRC18-209ENST00000464852 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
TNRC18-209ENST00000464852 SH2B2O14492 632 aaPredicted RBP12.69□□□□□ -0.38
TNRC18-209ENST00000464852 WTAPQ15007 396 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 FAM47AQ5JRC9 791 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 DCPSQ96C86 337 aaKnown RBP12.69□□□□□ -0.38
TNRC18-209ENST00000464852 ZNF274Q96GC6 653 aaPredicted RBP12.69□□□□□ -0.38
TNRC18-209ENST00000464852 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 TMX3Q96JJ7 454 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.69□□□□□ -0.38
TNRC18-209ENST00000464852 PPP2R3BQ9Y5P8 575 aa12.69□□□□□ -0.38
TNRC18-209ENST00000464852 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
TNRC18-209ENST00000464852 SPTBN5Q9NRC6 3674 aaKnown RBP12.68□□□□□ -0.38
TNRC18-209ENST00000464852 SHMT1P34896 483 aa12.68□□□□□ -0.38
TNRC18-209ENST00000464852 CERKLQ49MI3 558 aaPredicted RBP12.68□□□□□ -0.38
TNRC18-209ENST00000464852 PPP4R3BQ5MIZ7 849 aa12.68□□□□□ -0.38
TNRC18-209ENST00000464852 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
TNRC18-209ENST00000464852 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
TNRC18-209ENST00000464852 DGKHQ86XP1 1220 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms