RNA–Protein interactions for RNA: ENST00000464670.1

LSP1-213, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-213ENST00000464670 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
LSP1-213ENST00000464670 CWC22Q9HCG8 908 aaKnown RBP16.36■□□□□ 0.21
LSP1-213ENST00000464670 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
LSP1-213ENST00000464670 AATFQ9NY61 560 aaKnown RBP eCLIP16.36■□□□□ 0.21
LSP1-213ENST00000464670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
LSP1-213ENST00000464670 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
LSP1-213ENST00000464670 SLC15A5A6NIM6 579 aa16.35■□□□□ 0.21
LSP1-213ENST00000464670 GDF11O95390 407 aa16.35■□□□□ 0.21
LSP1-213ENST00000464670 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
LSP1-213ENST00000464670 LBX2Q6XYB7 198 aa16.35■□□□□ 0.21
LSP1-213ENST00000464670 TGFBRAP1Q8WUH2 860 aa16.35■□□□□ 0.21
LSP1-213ENST00000464670 USP17L15C9J2P7 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L13C9JLJ4 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L11C9JVI0 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L18D6R9N7 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L22D6RA61 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L17D6RBQ6 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L19D6RCP7 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L20D6RJB6 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 CNMDO75829 334 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 HLA-DOAP06340 250 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP14P54578 494 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 USP17L24Q0WX57 530 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 GRB14Q14449 540 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 MAPKAPK5Q8IW41 473 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 FAM161BQ96MY7 647 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
LSP1-213ENST00000464670 FLRT1Q9NZU1 646 aa16.34■□□□□ 0.21
LSP1-213ENST00000464670 PTPREP23469 700 aa16.33■□□□□ 0.2
LSP1-213ENST00000464670 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
LSP1-213ENST00000464670 PALD1Q9ULE6 856 aa16.33■□□□□ 0.2
LSP1-213ENST00000464670 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
LSP1-213ENST00000464670 IGHA2P01877 340 aa16.32■□□□□ 0.2
LSP1-213ENST00000464670 ATN1P54259 1190 aaPredicted RBP16.32■□□□□ 0.2
LSP1-213ENST00000464670 RTP1P59025 263 aa16.32■□□□□ 0.2
LSP1-213ENST00000464670 ATP2B2Q01814 1243 aa16.32■□□□□ 0.2
LSP1-213ENST00000464670 TATDN1Q6P1N9 297 aa16.32■□□□□ 0.2
LSP1-213ENST00000464670 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
LSP1-213ENST00000464670 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
LSP1-213ENST00000464670 GH2P01242 217 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 CNGA1P29973 690 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 SMAD3P84022 425 aaKnown RBP16.31■□□□□ 0.2
LSP1-213ENST00000464670 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 CERS3Q8IU89 383 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 TMEM57Q8N5G2 664 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 MAFAQ8NHW3 353 aaPredicted RBP16.31■□□□□ 0.2
LSP1-213ENST00000464670 KIAA1683Q9H0B3 1180 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 SEMA6BQ9H3T3 888 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 GPR108Q9NPR9 543 aa16.31■□□□□ 0.2
LSP1-213ENST00000464670 CYBAP13498 195 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
LSP1-213ENST00000464670 SNX17Q15036 470 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 ITPRIPQ8IWB1 547 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 FEZ1Q99689 392 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 EHD4Q9H223 541 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 PRDM6Q9NQX0 595 aa16.3■□□□□ 0.2
LSP1-213ENST00000464670 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 TMEM265A0A087WTH1 108 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 KBTBD13C9JR72 458 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 CYP2E1P05181 493 aaPredicted RBP16.29■□□□□ 0.2
LSP1-213ENST00000464670 VCAM1P19320 739 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 CYP2C19P33261 490 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 SHHQ15465 462 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 SLC39A5Q6ZMH5 540 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 NPLOC4Q8TAT6 608 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 ZNF512BQ96KM6 892 aaPredicted RBP16.29■□□□□ 0.2
LSP1-213ENST00000464670 DDX19BQ9UMR2 479 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 ATP11BQ9Y2G3 1177 aa16.29■□□□□ 0.2
LSP1-213ENST00000464670 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
LSP1-213ENST00000464670 STRNO43815 780 aa16.28■□□□□ 0.2
LSP1-213ENST00000464670 GNAI2P04899 355 aa16.28■□□□□ 0.2
LSP1-213ENST00000464670 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
LSP1-213ENST00000464670 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
LSP1-213ENST00000464670 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
LSP1-213ENST00000464670 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
LSP1-213ENST00000464670 SERPINB13Q9UIV8 391 aa16.28■□□□□ 0.2
LSP1-213ENST00000464670 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
LSP1-213ENST00000464670 SEPT4O43236 478 aa16.27■□□□□ 0.2
LSP1-213ENST00000464670 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
LSP1-213ENST00000464670 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
LSP1-213ENST00000464670 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
LSP1-213ENST00000464670 TTYH1Q9H313 450 aaPredicted RBP16.27■□□□□ 0.2
LSP1-213ENST00000464670 SNRKQ9NRH2 765 aa16.27■□□□□ 0.2
LSP1-213ENST00000464670 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
LSP1-213ENST00000464670 PNMA6EA0A0J9YXQ4 647 aa16.26■□□□□ 0.19
LSP1-213ENST00000464670 RLBP1P12271 317 aa16.26■□□□□ 0.19
LSP1-213ENST00000464670 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
LSP1-213ENST00000464670 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
LSP1-213ENST00000464670 ABCB5Q2M3G0 1257 aa16.26■□□□□ 0.19
LSP1-213ENST00000464670 CERKLQ49MI3 558 aaPredicted RBP16.26■□□□□ 0.19
LSP1-213ENST00000464670 TNNI3KQ59H18 835 aa16.26■□□□□ 0.19
LSP1-213ENST00000464670 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms