RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 ERVK-24P63145 666 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 TATDN1Q6P1N9 297 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
RPP40-203ENST00000464646 HMX1Q9NP08 348 aaPredicted RBP16.69■□□□□ 0.26
RPP40-203ENST00000464646 MORF4L1Q9UBU8 362 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 COLQQ9Y215 455 aaPredicted RBP16.69■□□□□ 0.26
RPP40-203ENST00000464646 NR2E3Q9Y5X4 410 aa16.69■□□□□ 0.26
RPP40-203ENST00000464646 MBD4O95243 580 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 CYP2D6P10635 497 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 MAPK4P31152 587 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 TRIM32Q13049 653 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 SEPT2Q15019 361 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 Q3C1V9 767 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 SLFNL1Q499Z3 407 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 RBPJLQ9UBG7 517 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 MYH8P13535 1937 aa16.68■□□□□ 0.26
RPP40-203ENST00000464646 HTTP42858 3142 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 PRKAB2O43741 272 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 RAD21O60216 631 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 EVI5O60447 810 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 SHMT1P34896 483 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 CCNA1P78396 465 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 ATP2B2Q01814 1243 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 PLEKHH3Q7Z736 793 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 SOCS4Q8WXH5 440 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 PORCNQ9H237 461 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 RPAP3Q9H6T3 665 aaPredicted RBP16.67■□□□□ 0.26
RPP40-203ENST00000464646 DCP1AQ9NPI6 582 aaPredicted RBP16.67■□□□□ 0.26
RPP40-203ENST00000464646 GJD2Q9UKL4 321 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 CENPFP49454 3210 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
RPP40-203ENST00000464646 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
RPP40-203ENST00000464646 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
RPP40-203ENST00000464646 ATP5JP18859 108 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 VCAM1P19320 739 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 ADD2P35612 726 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 RGS2P41220 211 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 EVX2Q03828 476 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 SLC44A5Q8NCS7 719 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 TRIB2Q92519 343 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 PAWRQ96IZ0 340 aaKnown RBP16.66■□□□□ 0.26
RPP40-203ENST00000464646 TANGO6Q9C0B7 1094 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 IVNS1ABPQ9Y6Y0 642 aa16.66■□□□□ 0.26
RPP40-203ENST00000464646 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
RPP40-203ENST00000464646 TCRBV5S4A2TA0A5A2 114 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 CATSPERGQ6ZRH7 1159 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 HAUS7Q99871 368 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 KIAA1683Q9H0B3 1180 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
RPP40-203ENST00000464646 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 RABGAP1Q9Y3P9 1069 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 SLC4A4Q9Y6R1 1079 aa16.65■□□□□ 0.26
RPP40-203ENST00000464646 MYH7P12883 1935 aa16.64■□□□□ 0.26
RPP40-203ENST00000464646 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
RPP40-203ENST00000464646 PLS1Q14651 629 aa16.64■□□□□ 0.25
RPP40-203ENST00000464646 C12orf42Q96LP6 360 aa16.64■□□□□ 0.25
RPP40-203ENST00000464646 ARHGEF10LQ9HCE6 1279 aa16.64■□□□□ 0.25
RPP40-203ENST00000464646 CYP2D7A0A087X1C5 515 aa16.63■□□□□ 0.25
RPP40-203ENST00000464646 CHGBP05060 677 aa16.63■□□□□ 0.25
RPP40-203ENST00000464646 TMEM179Q6ZVK1 233 aa16.63■□□□□ 0.25
RPP40-203ENST00000464646 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
RPP40-203ENST00000464646 DIS3LQ8TF46 1054 aaKnown RBP16.63■□□□□ 0.25
RPP40-203ENST00000464646 ATP8A2Q9NTI2 1148 aa16.63■□□□□ 0.25
RPP40-203ENST00000464646 PLXNB2O15031 1838 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 USP17L12C9JPN9 530 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 USP17L21D6R901 530 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 CAPN2P17655 700 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 CNGA1P29973 690 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 ICA1Q05084 483 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 GABPAQ06546 454 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 CCL14Q16627 93 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 CLEC10AQ8IUN9 316 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 APBA2Q99767 749 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 ECHDC1Q9NTX5 307 aa16.62■□□□□ 0.25
RPP40-203ENST00000464646 AKR1B1P15121 316 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 CDK8P49336 464 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 MAP2K5Q13163 448 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 UBE3CQ15386 1083 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 MFSD14CQ5VZR4 134 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 C7orf61Q8IZ16 206 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 HOXC10Q9NYD6 342 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
RPP40-203ENST00000464646 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms