RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 POTEEQ6S8J3 1075 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 DNAJC2Q99543 621 aaKnown RBP23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 FEZ1Q99689 392 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 NUDT12Q9BQG2 462 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 ATP5JP18859 108 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 FXR1P51114 621 aaKnown RBP eCLIP23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 PDE3AQ14432 1141 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 RAB3GAP1Q15042 981 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 Q3C1V9 767 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 ANKLE1Q8NAG6 615 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 HMX1Q9NP08 348 aaPredicted RBP23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 RABGAP1Q9Y3P9 1069 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 NR2E3Q9Y5X4 410 aa23.53■■□□□ 1.36
MCF2L2-206ENST00000464626 PEX10O60683 326 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 GUCY1A2P33402 732 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 MAP3K21Q5TCX8 1036 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 LBX2Q6XYB7 198 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 CATSPERGQ6ZRH7 1159 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 TRMT44Q8IYL2 757 aaKnown RBP23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 TRIB2Q92519 343 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 USP6NLQ92738 828 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 DCP1AQ9NPI6 582 aaPredicted RBP23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 PAG1Q9NWQ8 432 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
MCF2L2-206ENST00000464626 RANBP2P49792 3224 aaKnown RBP23.51■■□□□ 1.35
MCF2L2-206ENST00000464626 CYP2B6P20813 491 aa23.51■■□□□ 1.35
MCF2L2-206ENST00000464626 LCORLQ8N3X6 602 aa23.51■■□□□ 1.35
MCF2L2-206ENST00000464626 ACER1Q8TDN7 264 aa23.51■■□□□ 1.35
MCF2L2-206ENST00000464626 PORCNQ9H237 461 aa23.51■■□□□ 1.35
MCF2L2-206ENST00000464626 VCAM1P19320 739 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 ADD2P35612 726 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 TRIM32Q13049 653 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 MORN1Q5T089 497 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 GPR142Q7Z601 462 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 EDC3Q96F86 508 aaKnown RBP23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 HAUS7Q99871 368 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 PAGR1Q9BTK6 254 aa23.5■■□□□ 1.35
MCF2L2-206ENST00000464626 CNMDO75829 334 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 CHRDL2Q6WN34 429 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 PLEKHH3Q7Z736 793 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 CCAR1Q8IX12 1150 aaKnown RBP23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 SDR42E1Q8WUS8 393 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 PAWRQ96IZ0 340 aaKnown RBP23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 BOLA2Q9H3K6 86 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 SWAP70Q9UH65 585 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 MYH7P12883 1935 aa23.49■■□□□ 1.35
MCF2L2-206ENST00000464626 RGS2P41220 211 aa23.48■■□□□ 1.35
MCF2L2-206ENST00000464626 CCNA1P78396 465 aa23.48■■□□□ 1.35
MCF2L2-206ENST00000464626 NECAB2Q7Z6G3 386 aa23.48■■□□□ 1.35
MCF2L2-206ENST00000464626 PRO3102Q9H379 93 aa23.48■■□□□ 1.35
MCF2L2-206ENST00000464626 ATP8A2Q9NTI2 1148 aa23.48■■□□□ 1.35
MCF2L2-206ENST00000464626 MYH8P13535 1937 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 ALPK3Q96L96 1907 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 EVX2Q03828 476 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 SEPT2Q15019 361 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 UBE3CQ15386 1083 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 LRRCC1Q9C099 1032 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 ARMT1Q9H993 441 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 OGDHLQ9ULD0 1010 aa23.47■■□□□ 1.35
MCF2L2-206ENST00000464626 EVI5O60447 810 aa23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 GLRX3O76003 335 aaKnown RBP23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 PRKAR2AP13861 404 aaKnown RBP23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 ZKSCAN1P17029 563 aaPredicted RBP23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 C20orf194Q5TEA3 1177 aa23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 APBA2Q99767 749 aa23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 RPAP3Q9H6T3 665 aaPredicted RBP23.46■■□□□ 1.35
MCF2L2-206ENST00000464626 BAZ2AQ9UIF9 1905 aaKnown RBP23.45■■□□□ 1.35
MCF2L2-206ENST00000464626 A0A1W2PRG0 241 aa23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 MBD4O95243 580 aa23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 MNX1P50219 401 aaPredicted RBP23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 TMEM179Q6ZVK1 233 aa23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 DIS3LQ8TF46 1054 aaKnown RBP23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 RBM27Q9P2N5 1060 aaKnown RBP23.45■■□□□ 1.34
MCF2L2-206ENST00000464626 SPDYE16A6NNV3 312 aaPredicted RBP23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 MPHOSPH10O00566 681 aaKnown RBP23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 CYP2D6P10635 497 aa23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 MAP2K5Q13163 448 aa23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 NBPF3Q9H094 633 aa23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 BTBD7Q9P203 1132 aa23.44■■□□□ 1.34
MCF2L2-206ENST00000464626 PRKAB2O43741 272 aa23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 CACNB2Q08289 660 aaPredicted RBP23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 SLFNL1Q499Z3 407 aa23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 C12orf60Q5U649 245 aa23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 SLC44A5Q8NCS7 719 aa23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 CWC22Q9HCG8 908 aaKnown RBP23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 RLFQ13129 1914 aa23.43■■□□□ 1.34
MCF2L2-206ENST00000464626 SLC15A5A6NIM6 579 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 HOXC6P09630 235 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 PTPREP23469 700 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 COG2Q14746 738 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 CCL14Q16627 93 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 ZSCAN25Q6NSZ9 544 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 DYNLL2Q96FJ2 89 aa23.42■■□□□ 1.34
MCF2L2-206ENST00000464626 CCDC17Q96LX7 622 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms