RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ARSHQ5FYA8 562 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 NLRC3Q7RTR2 1065 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 TAB3Q8N5C8 712 aaPredicted RBP9.65□□□□□ -0.86
PTCD3-205ENST00000464541 NETO1Q8TDF5 533 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 PPP1R13LQ8WUF5 828 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 ATG4CQ96DT6 458 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 CEACAM5P06731 702 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 ZNF865P0CJ78 1059 aaPredicted RBP9.64□□□□□ -0.87
PTCD3-205ENST00000464541 SPINK2P20155 84 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 HOXA10P31260 410 aaPredicted RBP9.64□□□□□ -0.87
PTCD3-205ENST00000464541 TNNI2P48788 182 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 INTS3Q68E01 1043 aaKnown RBP9.64□□□□□ -0.87
PTCD3-205ENST00000464541 SLC43A3Q8NBI5 491 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 OR6P1Q8NGX9 317 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 RIN3Q8TB24 985 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 TM9SF2Q99805 663 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 BSDC1Q9NW68 430 aaPredicted RBP9.64□□□□□ -0.87
PTCD3-205ENST00000464541 ZC3H7BQ9UGR2 993 aaKnown RBP9.64□□□□□ -0.87
PTCD3-205ENST00000464541 PPT2Q9UMR5 302 aa9.64□□□□□ -0.87
PTCD3-205ENST00000464541 TNFRSF10CO14798 259 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 PRNPP04156 253 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 NME1P15531 152 aaKnown RBP9.63□□□□□ -0.87
PTCD3-205ENST00000464541 ATF4P18848 351 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-205ENST00000464541 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-205ENST00000464541 ZC3H6P61129 1189 aaKnown RBP9.63□□□□□ -0.87
PTCD3-205ENST00000464541 IFI16Q16666 785 aaKnown RBP9.63□□□□□ -0.87
PTCD3-205ENST00000464541 CDH24Q86UP0 819 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 MISP3Q96FF7 219 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 SNX11Q9Y5W9 270 aa9.63□□□□□ -0.87
PTCD3-205ENST00000464541 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 SSTR4P31391 388 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 GBP1P32455 592 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 ARTNQ5T4W7 220 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
PTCD3-205ENST00000464541 FAM181AQ8N9Y4 354 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 SRRTQ9BXP5 876 aaKnown RBP9.62□□□□□ -0.87
PTCD3-205ENST00000464541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTCD3-205ENST00000464541 TNKS2Q9H2K2 1166 aa9.62□□□□□ -0.87
PTCD3-205ENST00000464541 SCO2A0A1W2PP80 73 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 MED26O95402 600 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 CLCN7P51798 805 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 EIF6P56537 245 aaKnown RBP9.61□□□□□ -0.87
PTCD3-205ENST00000464541 STK11IPQ8N1F8 1099 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 MFSD4AQ8N468 514 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 KIF2CQ99661 725 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 ASPNQ9BXN1 380 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 PCMTD2Q9NV79 361 aa9.61□□□□□ -0.87
PTCD3-205ENST00000464541 GIPRP48546 466 aa9.6□□□□□ -0.87
PTCD3-205ENST00000464541 CHMP4BP1P59074 171 aa9.6□□□□□ -0.87
PTCD3-205ENST00000464541 FBXW10Q5XX13 1052 aa9.6□□□□□ -0.87
PTCD3-205ENST00000464541 BAHD1Q8TBE0 780 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-205ENST00000464541 PIWIL2Q8TC59 973 aaKnown RBP9.6□□□□□ -0.87
PTCD3-205ENST00000464541 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
PTCD3-205ENST00000464541 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
PTCD3-205ENST00000464541 HYAL3O43820 417 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-205ENST00000464541 RNF4P78317 190 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 ARID5AQ03989 594 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 VSIG10LQ86VR7 867 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 LSRQ86X29 649 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-205ENST00000464541 SPACA3Q8IXA5 215 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
PTCD3-205ENST00000464541 CPLX3Q8WVH0 158 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 FBXL18Q96ME1 805 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 VAV3Q9UKW4 847 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 CAPN6Q9Y6Q1 641 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 U3KQE9 123 aa9.59□□□□□ -0.87
PTCD3-205ENST00000464541 UBOX5O94941 541 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 ITIH2P19823 946 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 PRKCQQ04759 706 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 NKPD1Q17RQ9 610 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 C19orf47Q8N9M1 422 aaKnown RBP9.58□□□□□ -0.88
PTCD3-205ENST00000464541 KREMEN1Q96MU8 473 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 GMLQ99445 158 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 ZFP64Q9NPA5 681 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 KCNH3Q9ULD8 1083 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 PLAGL2Q9UPG8 496 aa9.58□□□□□ -0.88
PTCD3-205ENST00000464541 COL17A1Q9UMD9 1497 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-205ENST00000464541 CNTNAP4Q9C0A0 1308 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 FAM155AB1AL88 458 aaPredicted RBP9.57□□□□□ -0.88
PTCD3-205ENST00000464541 GUCY2CP25092 1073 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 CCDC81Q6ZN84 652 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 SHDQ96IW2 340 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 DHRS1Q96LJ7 313 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
PTCD3-205ENST00000464541 CBX7O95931 251 aa9.56□□□□□ -0.88
PTCD3-205ENST00000464541 THAP5Q7Z6K1 395 aa9.56□□□□□ -0.88
PTCD3-205ENST00000464541 VWCEQ96DN2 955 aa9.56□□□□□ -0.88
PTCD3-205ENST00000464541 HRASLS5Q96KN8 279 aa9.56□□□□□ -0.88
PTCD3-205ENST00000464541 SLC9A7Q96T83 725 aa9.56□□□□□ -0.88
PTCD3-205ENST00000464541 ANGEL1Q9UNK9 670 aaKnown RBP9.56□□□□□ -0.88
PTCD3-205ENST00000464541 PRR33A8MZF0 331 aa9.55□□□□□ -0.88
PTCD3-205ENST00000464541 CLEC3AO75596 197 aa9.55□□□□□ -0.88
PTCD3-205ENST00000464541 FGRP09769 529 aa9.55□□□□□ -0.88
PTCD3-205ENST00000464541 POLR2BP30876 1174 aaKnown RBP9.55□□□□□ -0.88
PTCD3-205ENST00000464541 CCDC39Q9UFE4 941 aa9.55□□□□□ -0.88
PTCD3-205ENST00000464541 SLC5A6Q9Y289 635 aa9.55□□□□□ -0.88
PTCD3-205ENST00000464541 WNT11O96014 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms