RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
TNRC6A-205ENST00000464539 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 SARSP49591 514 aaKnown RBP13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 TGFB2P61812 414 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 AMPD2Q01433 879 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 ARHGAP27Q6ZUM4 889 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 CRACR2AQ9BSW2 395 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 ITIH6Q6UXX5 1313 aa13.03□□□□□ -0.32
TNRC6A-205ENST00000464539 GOLGA8KD6RF30 607 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 LIG3P49916 1009 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 SATB1Q01826 763 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 PDE4BQ07343 736 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 TEFQ10587 303 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 MTF1Q14872 753 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 PTPAQ15257 358 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 KCNH3Q9ULD8 1083 aa13.02□□□□□ -0.32
TNRC6A-205ENST00000464539 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 FSBPO95073 299 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 PBX1P40424 430 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 CCT5P48643 541 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 CKAP4Q07065 602 aaKnown RBP13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 MORC3Q14149 939 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 TNNI3KQ59H18 835 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 CCDC129Q6ZRS4 1044 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 AMIGO3Q86WK7 504 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 CAPS2Q9BXY5 557 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 MAN1B1Q9UKM7 699 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 FPGT-TNNI3KV9GXZ4 949 aa13.02□□□□□ -0.33
TNRC6A-205ENST00000464539 WDR19Q8NEZ3 1342 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 17.8
TNRC6A-205ENST00000464539 MFAP3LO75121 409 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 HSPA1AP0DMV8 641 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 HSPA1BP0DMV9 641 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 BMP6P22004 513 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 MARCKSP29966 332 aaPredicted RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 HOXC9P31274 260 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 RBL2Q08999 1139 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 YTHDF3Q7Z739 585 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
TNRC6A-205ENST00000464539 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 KIF28PB7ZC32 967 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 CPLX1O14810 134 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 CHUKO15111 745 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 OPA1O60313 960 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 CALRP27797 417 aaKnown RBP13□□□□□ -0.33
TNRC6A-205ENST00000464539 TDO2P48775 406 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 PLCD1P51178 756 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 POSTNQ15063 836 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 ZMYM1Q5SVZ6 1142 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 OTUD7BQ6GQQ9 843 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
TNRC6A-205ENST00000464539 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 GIMAP7Q8NHV1 300 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 EDC3Q96F86 508 aaKnown RBP13□□□□□ -0.33
TNRC6A-205ENST00000464539 XAGE2Q96GT9 111 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 MAP3K14Q99558 947 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 KAT14Q9H8E8 782 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
TNRC6A-205ENST00000464539 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
TNRC6A-205ENST00000464539 KIAA0754O94854 1291 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 MMP10P09238 476 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 SKOR1P84550 965 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 TRIM14Q14142 442 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 NEDD9Q14511 834 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 SPATA1Q5VX52 437 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 GGA2Q9UJY4 613 aa12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 IQSEC3Q9UPP2 1182 aaPredicted RBP12.99□□□□□ -0.33
TNRC6A-205ENST00000464539 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms