RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 CDK8P49336 464 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 PWP1Q13610 501 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 SNAP47Q5SQN1 464 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 FBXL19Q6PCT2 694 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-210ENST00000464313 GOLM1Q8NBJ4 401 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 JARID2Q92833 1246 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-210ENST00000464313 TGIF2Q9GZN2 237 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 MIR1-1HGQ9H1L0 117 aa6.66□□□□□ -1.34
PTPN12-210ENST00000464313 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.66□□□□□ -1.34
PTPN12-210ENST00000464313 F13A1P00488 732 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 LMNB2Q03252 620 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 NKPD1Q17RQ9 610 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
PTPN12-210ENST00000464313 UBE3DQ7Z6J8 389 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 RNF214Q8ND24 703 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 CCSER2Q9H7U1 834 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 PCDHA4Q9UN74 947 aa6.65□□□□□ -1.34
PTPN12-210ENST00000464313 AMIGO3Q86WK7 504 aa6.64□□□□□ -1.35
PTPN12-210ENST00000464313 FBXO27Q8NI29 283 aa6.64□□□□□ -1.35
PTPN12-210ENST00000464313 ZNF296Q8WUU4 475 aaPredicted RBP6.64□□□□□ -1.35
PTPN12-210ENST00000464313 SPON2Q9BUD6 331 aa6.64□□□□□ -1.35
PTPN12-210ENST00000464313 GTF2IRD1Q9UHL9 959 aa6.64□□□□□ -1.35
PTPN12-210ENST00000464313 CSADQ9Y600 493 aa6.64□□□□□ -1.35
PTPN12-210ENST00000464313 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 TLR3O15455 904 aaKnown RBP6.63□□□□□ -1.35
PTPN12-210ENST00000464313 C1QTNF9P0C862 333 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 AFMP43652 599 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 RANGAP1P46060 587 aaPredicted RBP6.63□□□□□ -1.35
PTPN12-210ENST00000464313 CRKP46108 304 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 ERVK-24P63145 666 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 HNRNPUQ00839 825 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN12-210ENST00000464313 PAK2Q13177 524 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 INPP5AQ14642 412 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 PPM1JQ5JR12 505 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 MPZL3Q6UWV2 235 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 KIAA0825Q8IV33 1275 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 EAF1Q96JC9 268 aaPredicted RBP6.63□□□□□ -1.35
PTPN12-210ENST00000464313 PRDM10Q9NQV6 1147 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 UBP1Q9NZI7 540 aa6.63□□□□□ -1.35
PTPN12-210ENST00000464313 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
PTPN12-210ENST00000464313 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPN12-210ENST00000464313 KRT1P04264 644 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 GLI1P08151 1106 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 LRFN4Q6PJG9 635 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 GATAD2BQ8WXI9 593 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 PLPPR2Q96GM1 343 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 KIRREL1Q96J84 757 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 CARS2Q9HA77 564 aaKnown RBP6.62□□□□□ -1.35
PTPN12-210ENST00000464313 KCNK12Q9HB15 430 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 KCNQ5Q9NR82 932 aa6.62□□□□□ -1.35
PTPN12-210ENST00000464313 FAM221AA4D161 298 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 GREM1O60565 184 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 NTF4P34130 210 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 WIPI1Q5MNZ9 446 aaPredicted RBP6.61□□□□□ -1.35
PTPN12-210ENST00000464313 DBX2Q6ZNG2 339 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 CYFIP1Q7L576 1253 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 C12orf40Q86WS4 652 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 TINF2Q9BSI4 451 aa6.61□□□□□ -1.35
PTPN12-210ENST00000464313 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 GNAT3A8MTJ3 354 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 CILPO75339 1184 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 EOMESO95936 686 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 TMEM67Q5HYA8 995 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 ELMO3Q96BJ8 720 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 C20orf173Q96LM9 149 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 DIRC2Q96SL1 478 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
PTPN12-210ENST00000464313 BPNT1O95861 308 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 CLCN7P51798 805 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 RPL6Q02878 288 aaKnown RBP6.59□□□□□ -1.35
PTPN12-210ENST00000464313 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 SCARA3Q6AZY7 606 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 CCDC84Q86UT8 332 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-210ENST00000464313 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 ATP13A1Q9HD20 1204 aa6.59□□□□□ -1.35
PTPN12-210ENST00000464313 RBAK-RBAKDNI3L0D1 243 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 GRIN3BO60391 1043 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 HOXA5P20719 270 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 ZC3H6P61129 1189 aaKnown RBP6.58□□□□□ -1.36
PTPN12-210ENST00000464313 APOBRQ0VD83 1088 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 MPP2Q14168 576 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 RELTQ969Z4 430 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 GPRASP2Q96D09 838 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 HSPA12BQ96MM6 686 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 NSUN3Q9H649 340 aaKnown RBP6.58□□□□□ -1.36
PTPN12-210ENST00000464313 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
PTPN12-210ENST00000464313 CNTNAP4Q9C0A0 1308 aa6.57□□□□□ -1.36
PTPN12-210ENST00000464313 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
PTPN12-210ENST00000464313 NPIPB6E9PJ23 425 aa6.57□□□□□ -1.36
PTPN12-210ENST00000464313 GFRA2O00451 464 aa6.57□□□□□ -1.36
PTPN12-210ENST00000464313 NFIBO00712 420 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms