RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 TDHQ8IZJ6 230 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 MAGEB6Q8N7X4 407 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 ACER1Q8TDN7 264 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 C12orf42Q96LP6 360 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
TMEM54-203ENST00000463914 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
TMEM54-203ENST00000463914 A0A0G2JMZ2 1700 aa12.5□□□□□ -0.41
TMEM54-203ENST00000463914 MYH8P13535 1937 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 LTBP2Q14767 1821 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 DLL1O00548 723 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 VCAM1P19320 739 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 EVX2Q03828 476 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 RAB3GAP1Q15042 981 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 TRMT44Q8IYL2 757 aaKnown RBP12.49□□□□□ -0.41
TMEM54-203ENST00000463914 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 CWC22Q9HCG8 908 aaKnown RBP12.49□□□□□ -0.41
TMEM54-203ENST00000463914 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 RLFQ13129 1914 aa12.49□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L20D6RJB6 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 SHMT1P34896 483 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
TMEM54-203ENST00000463914 USP17L24Q0WX57 530 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 LRIT3Q3SXY7 679 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
TMEM54-203ENST00000463914 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 EHD4Q9H223 541 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 BTBD7Q9P203 1132 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
TMEM54-203ENST00000463914 PARP14Q460N5 1801 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 SPDYE16A6NNV3 312 aaPredicted RBP12.47□□□□□ -0.41
TMEM54-203ENST00000463914 IGSF3O75054 1194 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 CCNA1P78396 465 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 ABCB5Q2M3G0 1257 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 CATSPERGQ6ZRH7 1159 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 NPLOC4Q8TAT6 608 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
TMEM54-203ENST00000463914 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
TMEM54-203ENST00000463914 SLC15A5A6NIM6 579 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 PTPREP23469 700 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 PLCD1P51178 756 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 GRB14Q14449 540 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 SEPT2Q15019 361 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
TMEM54-203ENST00000463914 MFSD14CQ5VZR4 134 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 CEP85Q6P2H3 762 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 AACSQ86V21 672 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 TRPV1Q8NER1 839 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 EDC3Q96F86 508 aaKnown RBP12.46□□□□□ -0.41
TMEM54-203ENST00000463914 RPAP3Q9H6T3 665 aaPredicted RBP12.46□□□□□ -0.41
TMEM54-203ENST00000463914 MTMR10Q9NXD2 777 aa12.46□□□□□ -0.41
TMEM54-203ENST00000463914 DDX20Q9UHI6 824 aaKnown RBP12.46□□□□□ -0.41
TMEM54-203ENST00000463914 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.42
TMEM54-203ENST00000463914 GLRX3O76003 335 aaKnown RBP12.45□□□□□ -0.42
TMEM54-203ENST00000463914 HOXC6P09630 235 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 CNGA1P29973 690 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 CYP2C19P33261 490 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
TMEM54-203ENST00000463914 USP14P54578 494 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 GABPAQ06546 454 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 CERS3Q8IU89 383 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 IVNS1ABPQ9Y6Y0 642 aa12.45□□□□□ -0.42
TMEM54-203ENST00000463914 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
TMEM54-203ENST00000463914 A0A1W2PRG0 241 aa12.44□□□□□ -0.42
TMEM54-203ENST00000463914 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
TMEM54-203ENST00000463914 CYP2D6P10635 497 aa12.44□□□□□ -0.42
TMEM54-203ENST00000463914 CYBAP13498 195 aa12.44□□□□□ -0.42
TMEM54-203ENST00000463914 SENP6Q9GZR1 1112 aaPredicted RBP12.44□□□□□ -0.42
TMEM54-203ENST00000463914 CABP5Q9NP86 173 aa12.44□□□□□ -0.42
TMEM54-203ENST00000463914 COL6A3P12111 3177 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 IGHA2P01877 340 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 PDE6AP16499 860 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 KIAA1755Q5JYT7 1200 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 LPAR1Q92633 364 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 MOV10L1Q9BXT6 1211 aaKnown RBP12.43□□□□□ -0.42
TMEM54-203ENST00000463914 TANGO6Q9C0B7 1094 aa12.43□□□□□ -0.42
TMEM54-203ENST00000463914 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms