RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
TSC2-209ENST00000463601 PRKAB2O43741 272 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 ADD2P35612 726 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 Q3C1V9 767 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 FEZ1Q99689 392 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 HAUS7Q99871 368 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 MYH8P13535 1937 aa23.29■■□□□ 1.32
TSC2-209ENST00000463601 SGPL1O95470 568 aa23.28■■□□□ 1.32
TSC2-209ENST00000463601 TRIM32Q13049 653 aa23.28■■□□□ 1.32
TSC2-209ENST00000463601 GPRC5AQ8NFJ5 357 aa23.28■■□□□ 1.32
TSC2-209ENST00000463601 C12orf42Q96LP6 360 aa23.28■■□□□ 1.32
TSC2-209ENST00000463601 DEFB118Q96PH6 123 aa23.28■■□□□ 1.32
TSC2-209ENST00000463601 H0YGN5 161 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 SMIM22K7EJ46 135 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 MBD4O95243 580 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 SEPT2Q15019 361 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 SLC44A5Q8NCS7 719 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 PAGR1Q9BTK6 254 aa23.27■■□□□ 1.32
TSC2-209ENST00000463601 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 ERVK-24P63145 666 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 HABP4Q5JVS0 413 aaKnown RBP23.26■■□□□ 1.31
TSC2-209ENST00000463601 GCC1Q96CN9 775 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 PORCNQ9H237 461 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
TSC2-209ENST00000463601 PAK6Q9NQU5 681 aaPredicted RBP23.26■■□□□ 1.31
TSC2-209ENST00000463601 VCAM1P19320 739 aa23.25■■□□□ 1.31
TSC2-209ENST00000463601 CYP2B6P20813 491 aa23.25■■□□□ 1.31
TSC2-209ENST00000463601 KIAA1683Q9H0B3 1180 aa23.25■■□□□ 1.31
TSC2-209ENST00000463601 ECHDC1Q9NTX5 307 aa23.25■■□□□ 1.31
TSC2-209ENST00000463601 CYP2D7A0A087X1C5 515 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L15C9J2P7 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L13C9JLJ4 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L11C9JVI0 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L18D6R9N7 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L22D6RA61 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L17D6RBQ6 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L19D6RCP7 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L20D6RJB6 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 MPHOSPH10O00566 681 aaKnown RBP23.24■■□□□ 1.31
TSC2-209ENST00000463601 CNMDO75829 334 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 FARP2O94887 1054 aaPredicted RBP23.24■■□□□ 1.31
TSC2-209ENST00000463601 HMGCRP04035 888 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 USP17L24Q0WX57 530 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 CATSPERGQ6ZRH7 1159 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 TRIB2Q92519 343 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 DPF3Q92784 378 aa23.24■■□□□ 1.31
TSC2-209ENST00000463601 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.24■■□□□ 1.31
TSC2-209ENST00000463601 A0A1W2PRG0 241 aa23.23■■□□□ 1.31
TSC2-209ENST00000463601 TFRCP02786 760 aaKnown RBP23.23■■□□□ 1.31
TSC2-209ENST00000463601 USP14P54578 494 aa23.23■■□□□ 1.31
TSC2-209ENST00000463601 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.23■■□□□ 1.311e-6■■■■□ 25.8
TSC2-209ENST00000463601 UBE3CQ15386 1083 aa23.22■■□□□ 1.31
TSC2-209ENST00000463601 TSHZ3Q63HK5 1081 aa23.22■■□□□ 1.31
TSC2-209ENST00000463601 CLEC10AQ8IUN9 316 aa23.22■■□□□ 1.31
TSC2-209ENST00000463601 CRISPLD2Q9H0B8 497 aa23.22■■□□□ 1.31
TSC2-209ENST00000463601 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
TSC2-209ENST00000463601 MAPK4P31152 587 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
TSC2-209ENST00000463601 GPR142Q7Z601 462 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 GTF3C2Q8WUA4 911 aaPredicted RBP23.21■■□□□ 1.31
TSC2-209ENST00000463601 USP6NLQ92738 828 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 GPATCH3Q96I76 525 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 NUDT12Q9BQG2 462 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 PUS7LQ9H0K6 701 aaKnown RBP23.21■■□□□ 1.31
TSC2-209ENST00000463601 RWDD1Q9H446 243 aaPredicted RBP23.21■■□□□ 1.31
TSC2-209ENST00000463601 RPAP3Q9H6T3 665 aaPredicted RBP23.21■■□□□ 1.31
TSC2-209ENST00000463601 RLFQ13129 1914 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 ALPK3Q96L96 1907 aa23.21■■□□□ 1.31
TSC2-209ENST00000463601 AKR1B1P15121 316 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 KIAA1755Q5JYT7 1200 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 ANKRD45Q5TZF3 282 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 SMC5Q8IY18 1101 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 OTUD7AQ8TE49 926 aaPredicted RBP23.2■■□□□ 1.3
TSC2-209ENST00000463601 ATP8A2Q9NTI2 1148 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 BTBD7Q9P203 1132 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 RABGAP1Q9Y3P9 1069 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 TRIOBPQ9H2D6 2365 aa23.2■■□□□ 1.3
TSC2-209ENST00000463601 TTC41PQ6P2S7 1318 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 SALL3Q9BXA9 1300 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 USP17L12C9JPN9 530 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 USP17L21D6R901 530 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 IGHDP01880 384 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 CCL14Q16627 93 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 MORN1Q5T089 497 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 PLEKHH3Q7Z736 793 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 SIAH1Q8IUQ4 282 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 CCAR1Q8IX12 1150 aaKnown RBP23.19■■□□□ 1.3
TSC2-209ENST00000463601 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
TSC2-209ENST00000463601 SLC4A4Q9Y6R1 1079 aa23.19■■□□□ 1.3
TSC2-209ENST00000463601 RANBP2P49792 3224 aaKnown RBP23.19■■□□□ 1.3
TSC2-209ENST00000463601 RPTORQ8N122 1335 aa23.18■■□□□ 1.3
TSC2-209ENST00000463601 SPDYE16A6NNV3 312 aaPredicted RBP23.18■■□□□ 1.3
TSC2-209ENST00000463601 SOCS4Q8WXH5 440 aa23.18■■□□□ 1.3
TSC2-209ENST00000463601 HTATIP2Q9BUP3 242 aa23.18■■□□□ 1.3
TSC2-209ENST00000463601 HMX1Q9NP08 348 aaPredicted RBP23.18■■□□□ 1.3
TSC2-209ENST00000463601 SWAP70Q9UH65 585 aa23.18■■□□□ 1.3
TSC2-209ENST00000463601 XRCC5P13010 732 aaKnown RBP23.17■■□□□ 1.3
TSC2-209ENST00000463601 PRKAR2AP13861 404 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms