RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 RGS2P41220 211 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 CACNB2Q08289 660 aaPredicted RBP28.21■■■□□ 2.11
SSNA1-203ENST00000463511 RAB3GAP1Q15042 981 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 MORN1Q5T089 497 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 CEP85Q6P2H3 762 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 PLEKHH3Q7Z736 793 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 TRMT44Q8IYL2 757 aaKnown RBP28.21■■■□□ 2.11
SSNA1-203ENST00000463511 C12orf42Q96LP6 360 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 GDF15Q99988 308 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 EHD4Q9H223 541 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 EXOC6BQ9Y2D4 811 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 COL6A3P12111 3177 aa28.21■■■□□ 2.11
SSNA1-203ENST00000463511 PFASO15067 1338 aa28.2■■■□□ 2.11
SSNA1-203ENST00000463511 SYN1P17600 705 aa28.2■■■□□ 2.1
SSNA1-203ENST00000463511 MAP3K12Q12852 859 aa28.2■■■□□ 2.1
SSNA1-203ENST00000463511 AACSQ86V21 672 aa28.2■■■□□ 2.1
SSNA1-203ENST00000463511 APBA2Q99767 749 aa28.2■■■□□ 2.1
SSNA1-203ENST00000463511 CWC22Q9HCG8 908 aaKnown RBP28.2■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 CCND3P30281 292 aaPredicted RBP28.19■■■□□ 2.1
SSNA1-203ENST00000463511 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
SSNA1-203ENST00000463511 CERKLQ49MI3 558 aaPredicted RBP28.19■■■□□ 2.1
SSNA1-203ENST00000463511 CNMDO75829 334 aa28.18■■■□□ 2.1
SSNA1-203ENST00000463511 ABCB5Q2M3G0 1257 aa28.18■■■□□ 2.1
SSNA1-203ENST00000463511 TTC6Q86TZ1 520 aa28.18■■■□□ 2.1
SSNA1-203ENST00000463511 COG6Q9Y2V7 657 aa28.18■■■□□ 2.1
SSNA1-203ENST00000463511 RABGAP1Q9Y3P9 1069 aa28.18■■■□□ 2.1
SSNA1-203ENST00000463511 VCAM1P19320 739 aa28.17■■■□□ 2.1
SSNA1-203ENST00000463511 BMP8BP34820 402 aa28.17■■■□□ 2.1
SSNA1-203ENST00000463511 USP14P54578 494 aa28.17■■■□□ 2.1
SSNA1-203ENST00000463511 ERC1Q8IUD2 1116 aa28.17■■■□□ 2.1
SSNA1-203ENST00000463511 ACER1Q8TDN7 264 aa28.17■■■□□ 2.1
SSNA1-203ENST00000463511 RIOK1Q9BRS2 568 aaKnown RBP28.17■■■□□ 2.1
SSNA1-203ENST00000463511 BAZ2AQ9UIF9 1905 aaKnown RBP28.16■■■□□ 2.1
SSNA1-203ENST00000463511 SHMT1P34896 483 aa28.16■■■□□ 2.1
SSNA1-203ENST00000463511 PLCD1P51178 756 aa28.16■■■□□ 2.1
SSNA1-203ENST00000463511 WDR78Q5VTH9 848 aa28.16■■■□□ 2.1
SSNA1-203ENST00000463511 KIAA1683Q9H0B3 1180 aa28.16■■■□□ 2.1
SSNA1-203ENST00000463511 RLFQ13129 1914 aa28.16■■■□□ 2.1
SSNA1-203ENST00000463511 DNAH12Q6ZR08 3092 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 MAGEA10P43363 369 aaPredicted RBP28.15■■■□□ 2.1
SSNA1-203ENST00000463511 CCNA1P78396 465 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 MAP2K5Q13163 448 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 LHX8Q68G74 356 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 CATSPERGQ6ZRH7 1159 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 IL1RAPL2Q9NP60 686 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 CABP5Q9NP86 173 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 SUPT16HQ9Y5B9 1047 aaKnown RBP28.15■■■□□ 2.1
SSNA1-203ENST00000463511 A0A0G2JMZ2 1700 aa28.15■■■□□ 2.1
SSNA1-203ENST00000463511 MYH7P12883 1935 aa28.14■■■□□ 2.1
SSNA1-203ENST00000463511 TMED8Q6PL24 325 aaPredicted RBP28.14■■■□□ 2.1
SSNA1-203ENST00000463511 MAGEB6P1A0A0J9YX57 407 aa28.13■■■□□ 2.09
SSNA1-203ENST00000463511 POLR3DP05423 398 aaPredicted RBP28.13■■■□□ 2.09
SSNA1-203ENST00000463511 COL6A1P12109 1028 aa28.13■■■□□ 2.09
SSNA1-203ENST00000463511 EDC3Q96F86 508 aaKnown RBP28.13■■■□□ 2.09
SSNA1-203ENST00000463511 RPAP3Q9H6T3 665 aaPredicted RBP28.13■■■□□ 2.09
SSNA1-203ENST00000463511 BTBD7Q9P203 1132 aa28.13■■■□□ 2.09
SSNA1-203ENST00000463511 PARP14Q460N5 1801 aa28.13■■■□□ 2.09
SSNA1-203ENST00000463511 ZNF236Q9UL36 1845 aa28.13■■■□□ 2.09
SSNA1-203ENST00000463511 GLRX3O76003 335 aaKnown RBP28.12■■■□□ 2.09
SSNA1-203ENST00000463511 EVX2Q03828 476 aa28.12■■■□□ 2.09
SSNA1-203ENST00000463511 FLRT1Q9NZU1 646 aa28.12■■■□□ 2.09
SSNA1-203ENST00000463511 DDX19BQ9UMR2 479 aa28.12■■■□□ 2.09
SSNA1-203ENST00000463511 SPDYE16A6NNV3 312 aaPredicted RBP28.11■■■□□ 2.09
SSNA1-203ENST00000463511 PDE6AP16499 860 aa28.11■■■□□ 2.09
SSNA1-203ENST00000463511 GUCY1A2P33402 732 aa28.11■■■□□ 2.09
SSNA1-203ENST00000463511 LBX2Q6XYB7 198 aa28.11■■■□□ 2.09
SSNA1-203ENST00000463511 SLC15A5A6NIM6 579 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 PTPREP23469 700 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 GABPAQ06546 454 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 SEPT2Q15019 361 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 TTF1Q15361 905 aaPredicted RBP28.1■■■□□ 2.09
SSNA1-203ENST00000463511 LRRC26Q2I0M4 334 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 SLC9C2Q5TAH2 1124 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 RHPN1Q8TCX5 695 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 CRNKL1Q9BZJ0 848 aaKnown RBP28.1■■■□□ 2.09
SSNA1-203ENST00000463511 IVNS1ABPQ9Y6Y0 642 aa28.1■■■□□ 2.09
SSNA1-203ENST00000463511 COL11A1P12107 1806 aaPredicted RBP28.09■■■□□ 2.09
SSNA1-203ENST00000463511 HSP90AB4PQ58FF6 505 aa28.09■■■□□ 2.09
SSNA1-203ENST00000463511 MFSD14CQ5VZR4 134 aa28.09■■■□□ 2.09
SSNA1-203ENST00000463511 TDHQ8IZJ6 230 aa28.09■■■□□ 2.09
SSNA1-203ENST00000463511 MCM9Q9NXL9 1143 aa28.09■■■□□ 2.09
SSNA1-203ENST00000463511 ZNFX1Q9P2E3 1918 aaKnown RBP28.08■■■□□ 2.09
SSNA1-203ENST00000463511 APBB1O00213 710 aa28.08■■■□□ 2.09
SSNA1-203ENST00000463511 MPHOSPH10O00566 681 aaKnown RBP28.08■■■□□ 2.09
SSNA1-203ENST00000463511 GRB14Q14449 540 aa28.08■■■□□ 2.09
SSNA1-203ENST00000463511 SDR42E1Q8WUS8 393 aa28.08■■■□□ 2.09
SSNA1-203ENST00000463511 DNAJC2Q99543 621 aaKnown RBP28.08■■■□□ 2.09
SSNA1-203ENST00000463511 UBE2OQ9C0C9 1292 aaKnown RBP28.08■■■□□ 2.09
SSNA1-203ENST00000463511 ZNF532Q9HCE3 1301 aa28.08■■■□□ 2.09
SSNA1-203ENST00000463511 GOLIM4O00461 696 aa28.07■■■□□ 2.08
SSNA1-203ENST00000463511 NPLOC4Q8TAT6 608 aa28.07■■■□□ 2.08
SSNA1-203ENST00000463511 BCL11AQ9H165 835 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms