RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 GRK4P32298 578 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 CAP1Q01518 475 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 SLFNL1Q499Z3 407 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 SLAIN1Q8ND83 568 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 STRBPQ96SI9 672 aaKnown RBP15.69■□□□□ 0.1
HDAC1-203ENST00000463172 HTTP42858 3142 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 GPAA1O43292 621 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 APPP05067 770 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 CYP2D6P10635 497 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 TDO2P48775 406 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 HERVK_113P62684 666 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 PRKCZQ05513 592 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 SEPT2Q15019 361 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 ZYXQ15942 572 aaKnown RBP15.68■□□□□ 0.1
HDAC1-203ENST00000463172 C16orf86Q6ZW13 317 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 TICAM2Q86XR7 235 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 GPRC5AQ8NFJ5 357 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 CWC22Q9HCG8 908 aaKnown RBP15.68■□□□□ 0.1
HDAC1-203ENST00000463172 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
HDAC1-203ENST00000463172 SLC3A2P08195 630 aaKnown RBP15.67■□□□□ 0.1
HDAC1-203ENST00000463172 CTGFP29279 349 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 CDK8P49336 464 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 SHROOM1Q2M3G4 852 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-203ENST00000463172 SBK1Q52WX2 424 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 CTR9Q6PD62 1173 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 SH3TC2Q8TF17 1288 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 OSBP2Q969R2 916 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 EVI5LQ96CN4 794 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 DYNLL2Q96FJ2 89 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 P2RX7Q99572 595 aaKnown RBP15.67■□□□□ 0.1
HDAC1-203ENST00000463172 MKNK2Q9HBH9 465 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 STAP2Q9UGK3 403 aa15.67■□□□□ 0.1
HDAC1-203ENST00000463172 CCNA1P78396 465 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 ICA1Q05084 483 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 IRF5Q13568 498 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 NKX2-3Q8TAU0 364 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 OTUD7AQ8TE49 926 aaPredicted RBP15.66■□□□□ 0.1
HDAC1-203ENST00000463172 PXYLP1Q8TE99 480 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 SUPT16HQ9Y5B9 1047 aaKnown RBP15.66■□□□□ 0.1
HDAC1-203ENST00000463172 DOCK3Q8IZD9 2030 aa15.66■□□□□ 0.1
HDAC1-203ENST00000463172 GSG1L2A8MUP6 293 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
HDAC1-203ENST00000463172 ADCY3O60266 1144 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 CHGBP05060 677 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 VCAM1P19320 739 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 MAPK4P31152 587 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 GUCY1A2P33402 732 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 FLT3LGP49771 235 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 PDE1AP54750 535 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 CATSPERGQ6ZRH7 1159 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 SLC44A5Q8NCS7 719 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 ACER1Q8TDN7 264 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 LPAR1Q92633 364 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 KANSL2Q9H9L4 492 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 RABGAP1Q9Y3P9 1069 aa15.65■□□□□ 0.1
HDAC1-203ENST00000463172 CENPFP49454 3210 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 AKR1B1P15121 316 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 CAPN2P17655 700 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 ERVK-9P63128 1117 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 ERVK-24P63145 666 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 SOCS4Q8WXH5 440 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 PAGR1Q9BTK6 254 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 NAPBQ9H115 298 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 RPAP3Q9H6T3 665 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-203ENST00000463172 HOXC10Q9NYD6 342 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 SALL3Q9BXA9 1300 aa15.64■□□□□ 0.09
HDAC1-203ENST00000463172 M0R2C6 588 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 MYCP01106 439 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-203ENST00000463172 ATP2B2Q01814 1243 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 PDE4BQ07343 736 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 ZMYM1Q5SVZ6 1142 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 CHD1LQ86WJ1 897 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 TRMT44Q8IYL2 757 aaKnown RBP15.63■□□□□ 0.09
HDAC1-203ENST00000463172 ZNF444Q8N0Y2 327 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-203ENST00000463172 NUDT12Q9BQG2 462 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 GOPCQ9HD26 462 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 GABRQQ9UN88 632 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 TMX2Q9Y320 296 aa15.63■□□□□ 0.09
HDAC1-203ENST00000463172 ROBO3Q96MS0 1386 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 POTEFA5A3E0 1075 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 EVX2Q03828 476 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 COG2Q14746 738 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 LBX2Q6XYB7 198 aa15.62■□□□□ 0.09
HDAC1-203ENST00000463172 IFNL3Q8IZI9 196 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms