RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 TREHO43280 583 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 ESR1P03372 595 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 RALGPS1Q5JS13 557 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 PRAMEF13Q5VWM6 474 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 ALG1LQ6GMV1 187 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 ZNF428Q96B54 188 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 IRF2BPLQ9H1B7 796 aa7.09□□□□□ -1.27
USH2A-203ENST00000463147 CWC22Q9HCG8 908 aaKnown RBP7.09□□□□□ -1.27
USH2A-203ENST00000463147 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 NKG7Q16617 165 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 SV2BQ7L1I2 683 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 CREG2Q8IUH2 290 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 TMEM151BQ8IW70 566 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 RIN3Q8TB24 985 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 BAHD1Q8TBE0 780 aaPredicted RBP7.08□□□□□ -1.28
USH2A-203ENST00000463147 ZCCHC4Q9H5U6 513 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
USH2A-203ENST00000463147 SOWAHDA6NJG2 315 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 RFXAPO00287 272 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 FBXO24O75426 580 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 LMNB1P20700 586 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 NR0B2Q15466 257 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 ZNF385BQ569K4 471 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
USH2A-203ENST00000463147 DBX2Q6ZNG2 339 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 ADAMTS10Q9H324 1103 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 GPATCH2Q9NW75 528 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 FAM8A1Q9UBU6 413 aa7.07□□□□□ -1.28
USH2A-203ENST00000463147 BRD1O95696 1058 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 TPP2P29144 1249 aaPredicted RBP7.06□□□□□ -1.28
USH2A-203ENST00000463147 ERVFC1P60507 584 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 DLG4P78352 724 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 SNX17Q15036 470 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 RASIP1Q5U651 963 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 TCERG1LQ5VWI1 586 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 SLC6A19Q695T7 634 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 MRPL41Q8IXM3 137 aaKnown RBP7.06□□□□□ -1.28
USH2A-203ENST00000463147 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 KCNK12Q9HB15 430 aa7.06□□□□□ -1.28
USH2A-203ENST00000463147 BIN2Q9UBW5 565 aaPredicted RBP7.06□□□□□ -1.28
USH2A-203ENST00000463147 GRK4P32298 578 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 ATP2B2Q01814 1243 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 CHRNEQ04844 493 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 DIEXFQ68CQ4 756 aaKnown RBP7.05□□□□□ -1.28
USH2A-203ENST00000463147 TMEM132EQ6IEE7 984 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 CDH24Q86UP0 819 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 RNF32Q9H0A6 362 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 KCNH3Q9ULD8 1083 aa7.05□□□□□ -1.28
USH2A-203ENST00000463147 CNOT6Q9ULM6 557 aaKnown RBP7.05□□□□□ -1.28
USH2A-203ENST00000463147 TEX51A0A1B0GUA7 166 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 CELA3AP09093 270 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 BMP7P18075 431 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 MAPK1P28482 360 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 RPS26P62854 115 aaKnown RBP7.04□□□□□ -1.28
USH2A-203ENST00000463147 PDE4BQ07343 736 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 KCNA1Q09470 495 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 GAB4Q2WGN9 574 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 ERICH6BQ5W0A0 696 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 XAGE3Q8WTP9 111 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 OSBPL7Q9BZF2 842 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 GPR62Q9BZJ7 368 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 MCOLN1Q9GZU1 580 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 DUSP13Q9UII6 198 aa7.04□□□□□ -1.28
USH2A-203ENST00000463147 SYN1P17600 705 aa7.03□□□□□ -1.28
USH2A-203ENST00000463147 PTPN11Q06124 597 aaPredicted RBP7.03□□□□□ -1.28
USH2A-203ENST00000463147 ZSCAN29Q8IWY8 852 aaPredicted RBP7.03□□□□□ -1.28
USH2A-203ENST00000463147 DUSP15Q9H1R2 295 aaPredicted RBP7.03□□□□□ -1.28
USH2A-203ENST00000463147 ZNF552Q9H707 407 aaPredicted RBP7.03□□□□□ -1.28
USH2A-203ENST00000463147 C12orf49Q9H741 205 aa7.03□□□□□ -1.28
USH2A-203ENST00000463147 FOXD2O60548 495 aaPredicted RBP7.02□□□□□ -1.29
USH2A-203ENST00000463147 ZGLP1P0C6A0 271 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 EGR3Q06889 387 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 DUSP4Q13115 394 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 NFIXQ14938 502 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 TTBK2Q6IQ55 1244 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 ZNF605Q86T29 641 aa7.02□□□□□ -1.29
USH2A-203ENST00000463147 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
USH2A-203ENST00000463147 YBX2Q9Y2T7 364 aaKnown RBP7.02□□□□□ -1.29
USH2A-203ENST00000463147 PGRP06401 933 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 MAPK8P45983 427 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 TSPYL5Q86VY4 417 aaPredicted RBP7.01□□□□□ -1.29
USH2A-203ENST00000463147 BORCS6Q96GS4 357 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 TMEM87BQ96K49 555 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 KCNC2Q96PR1 638 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 ADAM30Q9UKF2 790 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 TTF2Q9UNY4 1162 aaKnown RBP7.01□□□□□ -1.29
USH2A-203ENST00000463147 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 JAG2Q9Y219 1238 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
USH2A-203ENST00000463147 GFRA2O00451 464 aa7□□□□□ -1.29
USH2A-203ENST00000463147 USP17L7P0C7H9 530 aa7□□□□□ -1.29
USH2A-203ENST00000463147 LTKP29376 864 aa7□□□□□ -1.29
USH2A-203ENST00000463147 TRHRP34981 398 aaPredicted RBP7□□□□□ -1.29
USH2A-203ENST00000463147 PDZRN4Q6ZMN7 1036 aaPredicted RBP7□□□□□ -1.29
USH2A-203ENST00000463147 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms