RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 U2AF1L4Q8WU68 220 aaKnown RBP20.21■□□□□ 0.83
CHKB-202ENST00000463053 KIAA1683Q9H0B3 1180 aa20.21■□□□□ 0.83
CHKB-202ENST00000463053 CABP5Q9NP86 173 aa20.21■□□□□ 0.83
CHKB-202ENST00000463053 CYP2D7A0A087X1C5 515 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 CNMDO75829 334 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 TRIM32Q13049 653 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 TSHZ3Q63HK5 1081 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 GPRC5AQ8NFJ5 357 aa20.2■□□□□ 0.82
CHKB-202ENST00000463053 PUS7LQ9H0K6 701 aaKnown RBP20.2■□□□□ 0.82
CHKB-202ENST00000463053 SGPL1O95470 568 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 ERVK-9P63128 1117 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 ERVK-24P63145 666 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 NKX2-3Q8TAU0 364 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 FEZ1Q99689 392 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 PAGR1Q9BTK6 254 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■■□ 22.2
CHKB-202ENST00000463053 PORCNQ9H237 461 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 ECHDC1Q9NTX5 307 aa20.19■□□□□ 0.82
CHKB-202ENST00000463053 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
CHKB-202ENST00000463053 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 VCAM1P19320 739 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 SIAH1Q8IUQ4 282 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 ATP8A2Q9NTI2 1148 aa20.18■□□□□ 0.82
CHKB-202ENST00000463053 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 USP17L21D6R901 530 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 MPHOSPH10O00566 681 aaKnown RBP20.17■□□□□ 0.82
CHKB-202ENST00000463053 CYP2B6P20813 491 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 USP14P54578 494 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 KIAA1755Q5JYT7 1200 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 DEFB118Q96PH6 123 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 PAK6Q9NQU5 681 aaPredicted RBP20.17■□□□□ 0.82
CHKB-202ENST00000463053 MYH7P12883 1935 aa20.17■□□□□ 0.82
CHKB-202ENST00000463053 AKR1B1P15121 316 aa20.16■□□□□ 0.82
CHKB-202ENST00000463053 CLEC10AQ8IUN9 316 aa20.16■□□□□ 0.82
CHKB-202ENST00000463053 TRIB2Q92519 343 aa20.16■□□□□ 0.82
CHKB-202ENST00000463053 USP6NLQ92738 828 aa20.16■□□□□ 0.82
CHKB-202ENST00000463053 CDK8P49336 464 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
CHKB-202ENST00000463053 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
CHKB-202ENST00000463053 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
CHKB-202ENST00000463053 CRISPLD2Q9H0B8 497 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 RPAP3Q9H6T3 665 aaPredicted RBP20.15■□□□□ 0.82
CHKB-202ENST00000463053 BTBD7Q9P203 1132 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 SWAP70Q9UH65 585 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 RABGAP1Q9Y3P9 1069 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 SLC4A4Q9Y6R1 1079 aa20.15■□□□□ 0.82
CHKB-202ENST00000463053 H0YGN5 161 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 TFRCP02786 760 aaKnown RBP20.14■□□□□ 0.81
CHKB-202ENST00000463053 HMGCRP04035 888 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 MAPK4P31152 587 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 MORN1Q5T089 497 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 ZSCAN25Q6NSZ9 544 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 CTR9Q6PD62 1173 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 KBTBD3Q8NAB2 608 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 OSBP2Q969R2 916 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 STRBPQ96SI9 672 aaKnown RBP20.14■□□□□ 0.81
CHKB-202ENST00000463053 NUDT12Q9BQG2 462 aa20.14■□□□□ 0.81
CHKB-202ENST00000463053 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.14■□□□□ 0.813e-11■□□□□ 9.9
CHKB-202ENST00000463053 SPDYE16A6NNV3 312 aaPredicted RBP20.13■□□□□ 0.81
CHKB-202ENST00000463053 FARP2O94887 1054 aaPredicted RBP20.13■□□□□ 0.81
CHKB-202ENST00000463053 LBX2Q6XYB7 198 aa20.13■□□□□ 0.81
CHKB-202ENST00000463053 TMEM179Q6ZVK1 233 aa20.13■□□□□ 0.81
CHKB-202ENST00000463053 C16orf86Q6ZW13 317 aa20.13■□□□□ 0.81
CHKB-202ENST00000463053 PLEKHH3Q7Z736 793 aa20.13■□□□□ 0.81
CHKB-202ENST00000463053 CCL14Q16627 93 aa20.12■□□□□ 0.81
CHKB-202ENST00000463053 HABP4Q5JVS0 413 aaKnown RBP20.12■□□□□ 0.81
CHKB-202ENST00000463053 DPF3Q92784 378 aa20.12■□□□□ 0.81
CHKB-202ENST00000463053 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
CHKB-202ENST00000463053 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
CHKB-202ENST00000463053 XRCC5P13010 732 aaKnown RBP20.11■□□□□ 0.81
CHKB-202ENST00000463053 MAP3K21Q5TCX8 1036 aa20.11■□□□□ 0.81
CHKB-202ENST00000463053 SOCS4Q8WXH5 440 aa20.11■□□□□ 0.81
CHKB-202ENST00000463053 GCC1Q96CN9 775 aa20.11■□□□□ 0.81
CHKB-202ENST00000463053 CRBNQ96SW2 442 aa20.11■□□□□ 0.81
CHKB-202ENST00000463053 RLFQ13129 1914 aa20.1■□□□□ 0.81
CHKB-202ENST00000463053 RPTORQ8N122 1335 aa20.1■□□□□ 0.81
CHKB-202ENST00000463053 PI4K2BQ8TCG2 481 aa20.1■□□□□ 0.81
CHKB-202ENST00000463053 DIS3LQ8TF46 1054 aaKnown RBP20.1■□□□□ 0.81
CHKB-202ENST00000463053 CCDC17Q96LX7 622 aa20.1■□□□□ 0.81
CHKB-202ENST00000463053 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.1■□□□□ 0.81
CHKB-202ENST00000463053 HMX1Q9NP08 348 aaPredicted RBP20.1■□□□□ 0.81
CHKB-202ENST00000463053 COLQQ9Y215 455 aaPredicted RBP20.1■□□□□ 0.81
CHKB-202ENST00000463053 TMX2Q9Y320 296 aa20.1■□□□□ 0.81
CHKB-202ENST00000463053 M0R2C6 588 aa20.09■□□□□ 0.81
CHKB-202ENST00000463053 MNX1P50219 401 aaPredicted RBP20.09■□□□□ 0.81
CHKB-202ENST00000463053 ICA1Q05084 483 aa20.09■□□□□ 0.81
CHKB-202ENST00000463053 CACNB2Q08289 660 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms