RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	WDR18	Q9BV38	432 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	TBC1D2	Q9BYX2	928 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	GINM1	Q9NU53	330 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	CPA4	Q9UI42	421 aa		11.46	□□□□□ -0.57
PSMD4-208	ENST00000462970	LOC285556	D6RIA3	1793 aa		11.46	□□□□□ -0.58
PSMD4-208	ENST00000462970	CYP2C8	P10632	490 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	BACE1	P56817	501 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	CTDSPL2	Q05D32	466 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	TREML2	Q5T2D2	321 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	TMEM179	Q6ZVK1	233 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	ACER1	Q8TDN7	264 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	PARK7	Q99497	189 aa	Known RBP	11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	TOMM22	Q9NS69	142 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	MYH4	Q9Y623	1939 aa		11.45	□□□□□ -0.58
PSMD4-208	ENST00000462970	OSBP	P22059	807 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	IRX3	P78415	501 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	SP3	Q02447	781 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ICA1	Q05084	483 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	PDE4B	Q07343	736 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	PPARA	Q07869	468 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	USP17L2	Q6R6M4	530 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	CD99L2	Q8TCZ2	262 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	CCDC17	Q96LX7	622 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ZNF287	Q9HBT7	754 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ARHGEF10L	Q9HCE6	1279 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ZCCHC17	Q9NP64	241 aa	Known RBP	11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	AGTPBP1	Q9UPW5	1226 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	ZSWIM8	A7E2V4	1837 aa		11.44	□□□□□ -0.58
PSMD4-208	ENST00000462970	C19orf81	C9J6K1	198 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	FOXP2	O15409	715 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	HSPD1	P10809	573 aa	Known RBP	11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	RASA1	P20936	1047 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	GUCY1A2	P33402	732 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	HAND2	P61296	217 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	KIF22	Q14807	665 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	RRP12	Q5JTH9	1297 aa	Known RBP	11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	TICAM2	Q86XR7	235 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	RUFY2	Q8WXA3	655 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	ERO1A	Q96HE7	468 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	CFHR5	Q9BXR6	569 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	PPP4R2	Q9NY27	417 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	PNMA3	Q9UL41	463 aa		11.43	□□□□□ -0.58
PSMD4-208	ENST00000462970	ROBO3	Q96MS0	1386 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	TLR2	O60603	784 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	FGA	P02671	866 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	TSPY3	P0CV98	308 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	TSPY8	P0CW00	308 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	USP14	P54578	494 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	SH3D19	Q5HYK7	790 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	FAM47A	Q5JRC9	791 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	CTU1	Q7Z7A3	348 aa	Known RBP	11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	SH2D4A	Q9H788	454 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	INCENP	Q9NQS7	918 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	EMILIN3	Q9NT22	766 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	TAOK2	Q9UL54	1235 aa		11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	ISY1	Q9ULR0	285 aa	Known RBP	11.42	□□□□□ -0.58
PSMD4-208	ENST00000462970	MGAM	O43451	1857 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	RANBP6	O60518	1105 aa	Known RBP	11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	EEF2	P13639	858 aa	Known RBP	11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	CHML	P26374	656 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	TFAP4	Q01664	338 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	ALX1	Q15699	326 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	SPICE1	Q8N0Z3	855 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	TANGO6	Q9C0B7	1094 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	KIAA1683	Q9H0B3	1180 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	KANSL2	Q9H9L4	492 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	SLC45A1	Q9Y2W3	748 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	TRIM17	Q9Y577	477 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970	LAMA4	Q16363	1823 aa		11.41	□□□□□ -0.58
PSMD4-208	ENST00000462970		A0A1W2PRG0	241 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	TSPY2	A6NKD2	308 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	FMNL1	O95466	1100 aa	Predicted RBP	11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	VCAM1	P19320	739 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	ARHGEF6	Q15052	776 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	NOM1	Q5C9Z4	860 aa	Known RBP	11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	ANKRD13C	Q8N6S4	541 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	CHMP4C	Q96CF2	233 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	PAGR1	Q9BTK6	254 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	ARHGAP39	Q9C0H5	1083 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	EFCC1	Q9HA90	598 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	CLIP2	Q9UDT6	1046 aa		11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	GREB1L	Q9C091	1923 aa	Predicted RBP	11.4	□□□□□ -0.58
PSMD4-208	ENST00000462970	RAD50	Q92878	1312 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L15	C9J2P7	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L13	C9JLJ4	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L11	C9JVI0	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L18	D6R9N7	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L22	D6RA61	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L17	D6RBQ6	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L19	D6RCP7	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	USP17L20	D6RJB6	530 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	ZNF213	O14771	459 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	PSMC4	P43686	418 aa		11.39	□□□□□ -0.59
PSMD4-208	ENST00000462970	LACTB	P83111	547 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms