RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 R3HDMLQ9H3Y0 253 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 DIAPH3Q9NSV4 1193 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 IVNS1ABPQ9Y6Y0 642 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 DOCK1Q14185 1865 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L21D6R901 530 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 PLCD1P51178 756 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 SH3D19Q5HYK7 790 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 TATDN1Q6P1N9 297 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 CHD1LQ86WJ1 897 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 SLAIN1Q8ND83 568 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 GPRC5AQ8NFJ5 357 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 PUS7LQ9H0K6 701 aaKnown RBP10.67□□□□□ -0.7
DDX39B-216ENST00000462421 ASCC2Q9H1I8 757 aaPredicted RBP10.67□□□□□ -0.7
DDX39B-216ENST00000462421 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
DDX39B-216ENST00000462421 CASP8AP2Q9UKL3 1982 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 PATL2C9JE40 543 aaKnown RBP10.66□□□□□ -0.7
DDX39B-216ENST00000462421 TSPY3P0CV98 308 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 TSPY8P0CW00 308 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 MAPK4P31152 587 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 PDE1AP54750 535 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 TREML2Q5T2D2 321 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
DDX39B-216ENST00000462421 TICAM2Q86XR7 235 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 STK11IPQ8N1F8 1099 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 LPAR1Q92633 364 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 KANSL2Q9H9L4 492 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.66□□□□□ -0.7
DDX39B-216ENST00000462421 SRRDQ9UH36 339 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 PTCH2Q9Y6C5 1203 aa10.66□□□□□ -0.7
DDX39B-216ENST00000462421 PRKAB2O43741 272 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 MYCP01106 439 aaPredicted RBP10.65□□□□□ -0.7
DDX39B-216ENST00000462421 SHMT1P34896 483 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 CDK8P49336 464 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 SEPT2Q15019 361 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 C16orf86Q6ZW13 317 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 SOCS4Q8WXH5 440 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 STRBPQ96SI9 672 aaKnown RBP10.65□□□□□ -0.7
DDX39B-216ENST00000462421 KIAA1683Q9H0B3 1180 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 DNAJC18Q9H819 358 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 HELLSQ9NRZ9 838 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 HOXC10Q9NYD6 342 aa10.65□□□□□ -0.7
DDX39B-216ENST00000462421 SLURP2P0DP57 97 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 CYP2D6P10635 497 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 BCRP11274 1271 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 HOXA7P31268 230 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-216ENST00000462421 GRK4P32298 578 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 HERVK_113P62684 666 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 IKQ13123 557 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-216ENST00000462421 PLS1Q14651 629 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 SBK1Q52WX2 424 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 CTR9Q6PD62 1173 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
DDX39B-216ENST00000462421 MB21D1Q8N884 522 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 PI4K2BQ8TCG2 481 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 RUFY2Q8WXA3 655 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 DYNLL2Q96FJ2 89 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 RPAP3Q9H6T3 665 aaPredicted RBP10.64□□□□□ -0.71
DDX39B-216ENST00000462421 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
DDX39B-216ENST00000462421 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 WDR46O15213 610 aaKnown RBP10.63□□□□□ -0.71
DDX39B-216ENST00000462421 FLOT1O75955 427 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 CAPN2P17655 700 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 VCAM1P19320 739 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 IRX6P78412 446 aaPredicted RBP10.63□□□□□ -0.71
DDX39B-216ENST00000462421 NUCB1Q02818 461 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 PRKCZQ05513 592 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 GABPAQ06546 454 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 MCMDC2Q4G0Z9 681 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 SMC5Q8IY18 1101 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 OSBP2Q969R2 916 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 RABGAP1Q9Y3P9 1069 aa10.63□□□□□ -0.71
DDX39B-216ENST00000462421 M0R2C6 588 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 ADCY3O60266 1144 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 AKR1B1P15121 316 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 COPB2P35606 906 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 RGS2P41220 211 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 ERVK-9P63128 1117 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 ERVK-24P63145 666 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 MOGSQ13724 837 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 RRP1BQ14684 758 aaKnown RBP10.62□□□□□ -0.71
DDX39B-216ENST00000462421 COG2Q14746 738 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 SLFNL1Q499Z3 407 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 ZMYM1Q5SVZ6 1142 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 IFNL3Q8IZI9 196 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 SLC44A5Q8NCS7 719 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
DDX39B-216ENST00000462421 SH3TC2Q8TF17 1288 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 ARMC5Q96C12 935 aa10.62□□□□□ -0.71
DDX39B-216ENST00000462421 RNF41Q9H4P4 317 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms