RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 PRDM1O75626 825 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 FGAP02671 866 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 ICA1Q05084 483 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 GABPAQ06546 454 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 ALX1Q15699 326 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 PTPN18Q99952 460 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 AGTPBP1Q9UPW5 1226 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 MYH8P13535 1937 aa11.35□□□□□ -0.59
PKP4-208ENST00000462335 AKR1B1P15121 316 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 GSPT1P15170 499 aaKnown RBP11.34□□□□□ -0.59
PKP4-208ENST00000462335 CHMLP26374 656 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 HAND2P61296 217 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 TFAP4Q01664 338 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 SP3Q02447 781 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 TRDNQ13061 729 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
PKP4-208ENST00000462335 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 SAMD1Q6SPF0 538 aaPredicted RBP11.34□□□□□ -0.59
PKP4-208ENST00000462335 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 EPB41L4AQ9HCS5 686 aaPredicted RBP11.34□□□□□ -0.59
PKP4-208ENST00000462335 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
PKP4-208ENST00000462335 RAD50Q92878 1312 aa11.34□□□□□ -0.59
PKP4-208ENST00000462335 ATAD5Q96QE3 1844 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L15C9J2P7 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L13C9JLJ4 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L11C9JVI0 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L18D6R9N7 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L22D6RA61 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L17D6RBQ6 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L19D6RCP7 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L20D6RJB6 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 USP17L24Q0WX57 530 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 BMP2KLQ5H9B9 411 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 ZNF589Q86UQ0 364 aaPredicted RBP11.33□□□□□ -0.6
PKP4-208ENST00000462335 ZNF296Q8WUU4 475 aaPredicted RBP11.33□□□□□ -0.6
PKP4-208ENST00000462335 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 CLIP2Q9UDT6 1046 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
PKP4-208ENST00000462335 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 TLR2O60603 784 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 CDC45O75419 566 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 ECM2O94769 699 aaPredicted RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 CYP2C8P10632 490 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 PCP11498 1178 aaKnown RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 EEF2P13639 858 aaKnown RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 HOXD10P28358 340 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 EVX2Q03828 476 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 DGKZQ13574 1117 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 SH3D19Q5HYK7 790 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 ESR2Q92731 530 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 KIAA1683Q9H0B3 1180 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
PKP4-208ENST00000462335 PCNTO95613 3336 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
PKP4-208ENST00000462335 TTLL1O95922 423 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 RASA1P20936 1047 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 JAG1P78504 1218 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 IKQ13123 557 aaPredicted RBP11.31□□□□□ -0.6
PKP4-208ENST00000462335 SHROOM1Q2M3G4 852 aaPredicted RBP11.31□□□□□ -0.6
PKP4-208ENST00000462335 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
PKP4-208ENST00000462335 AKNAD1Q5T1N1 836 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 TREML2Q5T2D2 321 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
PKP4-208ENST00000462335 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
PKP4-208ENST00000462335 LPAR1Q92633 364 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 KRT23Q9C075 422 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 EFCC1Q9HA90 598 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 ANAPC4Q9UJX5 808 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
PKP4-208ENST00000462335 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
PKP4-208ENST00000462335 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
PKP4-208ENST00000462335 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 RALYLQ86SE5 291 aaKnown RBP11.3□□□□□ -0.6
PKP4-208ENST00000462335 SKAP1Q86WV1 359 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 ANKRD13CQ8N6S4 541 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 CD99L2Q8TCZ2 262 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
PKP4-208ENST00000462335 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
PKP4-208ENST00000462335 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms