RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CWC27Q6UX04 472 aaKnown RBP18.91■□□□□ 0.62
ERCC3-206ENST00000462306 CTU1Q7Z7A3 348 aaKnown RBP18.91■□□□□ 0.62
ERCC3-206ENST00000462306 SIAH1Q8IUQ4 282 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 STK11IPQ8N1F8 1099 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 CCDC136Q96JN2 1154 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 KIAA1683Q9H0B3 1180 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 DIAPH3Q9NSV4 1193 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 CPA4Q9UI42 421 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 MYH8P13535 1937 aa18.91■□□□□ 0.62
ERCC3-206ENST00000462306 A0A1W2PRG0 241 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 CAP1Q01518 475 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 USP17L2Q6R6M4 530 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 SKAP1Q86WV1 359 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 C12orf42Q96LP6 360 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
ERCC3-206ENST00000462306 MCOLN1Q9GZU1 580 aa18.9■□□□□ 0.62
ERCC3-206ENST00000462306 FGAP02671 866 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.61
ERCC3-206ENST00000462306 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 CD99L2Q8TCZ2 262 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 ERO1AQ96HE7 468 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 FEZ1Q99689 392 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 MKNK2Q9HBH9 465 aa18.89■□□□□ 0.61
ERCC3-206ENST00000462306 PRDM1O75626 825 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 BCRP11274 1271 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 USP14P54578 494 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 MFAP1P55081 439 aaKnown RBP18.88■□□□□ 0.61
ERCC3-206ENST00000462306 PABPC4Q13310 644 aaKnown RBP eCLIP18.88■□□□□ 0.61
ERCC3-206ENST00000462306 ZYXQ15942 572 aaKnown RBP18.88■□□□□ 0.61
ERCC3-206ENST00000462306 ASCC2Q9H1I8 757 aaPredicted RBP18.88■□□□□ 0.61
ERCC3-206ENST00000462306 IL25Q9H293 177 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 ANAPC4Q9UJX5 808 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 ZMYM6O95789 1325 aa18.88■□□□□ 0.61
ERCC3-206ENST00000462306 ICA1Q05084 483 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 CTDSPL2Q05D32 466 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 GREB1LQ9C091 1923 aaPredicted RBP18.87■□□□□ 0.61
ERCC3-206ENST00000462306 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 ZNF287Q9HBT7 754 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 PNMA3Q9UL41 463 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
ERCC3-206ENST00000462306 TACC3Q9Y6A5 838 aa18.87■□□□□ 0.61
ERCC3-206ENST00000462306 SLC3A2P08195 630 aaKnown RBP18.86■□□□□ 0.61
ERCC3-206ENST00000462306 OSBPP22059 807 aa18.86■□□□□ 0.61
ERCC3-206ENST00000462306 CHMLP26374 656 aa18.86■□□□□ 0.61
ERCC3-206ENST00000462306 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
ERCC3-206ENST00000462306 PDE4BQ07343 736 aa18.86■□□□□ 0.61
ERCC3-206ENST00000462306 OTOP1Q7RTM1 612 aa18.86■□□□□ 0.61
ERCC3-206ENST00000462306 ZNF444Q8N0Y2 327 aaPredicted RBP18.86■□□□□ 0.61
ERCC3-206ENST00000462306 SMCR8Q8TEV9 937 aaPredicted RBP18.86■□□□□ 0.61
ERCC3-206ENST00000462306 TMX2Q9Y320 296 aa18.86■□□□□ 0.61
ERCC3-206ENST00000462306 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 FGRP09769 529 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 EEF2P13639 858 aaKnown RBP18.85■□□□□ 0.61
ERCC3-206ENST00000462306 VCAM1P19320 739 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
ERCC3-206ENST00000462306 ARHGAP39Q9C0H5 1083 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 ARHGEF10LQ9HCE6 1279 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 INCENPQ9NQS7 918 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 TRIM17Q9Y577 477 aa18.85■□□□□ 0.61
ERCC3-206ENST00000462306 CTGFP29279 349 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 IRX3P78415 501 aaPredicted RBP18.84■□□□□ 0.61
ERCC3-206ENST00000462306 PKN2Q16513 984 aaKnown RBP18.84■□□□□ 0.61
ERCC3-206ENST00000462306 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 ERICH6BQ5W0A0 696 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 ABHD8Q96I13 439 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 DSCC1Q9BVC3 393 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
ERCC3-206ENST00000462306 PLIN4Q96Q06 1357 aa18.83■□□□□ 0.61
ERCC3-206ENST00000462306 RAD50Q92878 1312 aa18.83■□□□□ 0.61
ERCC3-206ENST00000462306 USP17L15C9J2P7 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L13C9JLJ4 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L11C9JVI0 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L18D6R9N7 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L22D6RA61 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L17D6RBQ6 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L19D6RCP7 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L20D6RJB6 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 GCLCP48506 637 aaPredicted RBP18.83■□□□□ 0.6
ERCC3-206ENST00000462306 USP17L24Q0WX57 530 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 CATSPERGQ6ZRH7 1159 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 ANKRD13CQ8N6S4 541 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 NEDD1Q8NHV4 660 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 NBPF3Q9H094 633 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 SH2D4AQ9H788 454 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 VCPKMTQ9H867 229 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 NYAP2Q9P242 653 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 ZSWIM8A7E2V4 1837 aa18.83■□□□□ 0.6
ERCC3-206ENST00000462306 ORC4O43929 436 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 HAND2P61296 217 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 HERVK_113P62684 666 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 TFAP4Q01664 338 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 ATP2B2Q01814 1243 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 KIF22Q14807 665 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 FAM110CQ1W6H9 321 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 FAM47AQ5JRC9 791 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 POTEEQ6S8J3 1075 aa18.82■□□□□ 0.6
ERCC3-206ENST00000462306 RPAP3Q9H6T3 665 aaPredicted RBP18.82■□□□□ 0.6
ERCC3-206ENST00000462306 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
ERCC3-206ENST00000462306 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms