RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PUS7LQ9H0K6 701 aaKnown RBP22.83■■□□□ 1.25
VARS-220ENST00000461874 SWAP70Q9UH65 585 aa22.83■■□□□ 1.25
VARS-220ENST00000461874 DOCK3Q8IZD9 2030 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 NAV1Q8NEY1 1877 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L15C9J2P7 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L13C9JLJ4 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L11C9JVI0 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L18D6R9N7 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L22D6RA61 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L17D6RBQ6 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L19D6RCP7 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L20D6RJB6 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 INHAP05111 366 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 GJA8P48165 433 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 USP17L24Q0WX57 530 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 POTEEQ6S8J3 1075 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 SLC44A5Q8NCS7 719 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 DYNLL2Q96FJ2 89 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 UNC93B1Q9H1C4 597 aa22.82■■□□□ 1.24
VARS-220ENST00000461874 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
VARS-220ENST00000461874 C12orf60Q5U649 245 aa22.81■■□□□ 1.24
VARS-220ENST00000461874 KBTBD3Q8NAB2 608 aa22.81■■□□□ 1.24
VARS-220ENST00000461874 SLC4A4Q9Y6R1 1079 aa22.81■■□□□ 1.24
VARS-220ENST00000461874 USP17L12C9JPN9 530 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 USP17L21D6R901 530 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 VCAM1P19320 739 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 Q3C1V9 767 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 CATSPERGQ6ZRH7 1159 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 DDRGK1Q96HY6 314 aa22.8■■□□□ 1.24
VARS-220ENST00000461874 CYP2D7A0A087X1C5 515 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 A0A1W2PRG0 241 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 SMIM22K7EJ46 135 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 ERVK-9P63128 1117 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 ERVK-24P63145 666 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 TMEM179Q6ZVK1 233 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 AMOTL1Q8IY63 956 aa22.79■■□□□ 1.24
VARS-220ENST00000461874 MAPK4P31152 587 aa22.78■■□□□ 1.24
VARS-220ENST00000461874 U2AF1L4Q8WU68 220 aaKnown RBP22.78■■□□□ 1.24
VARS-220ENST00000461874 STRBPQ96SI9 672 aaKnown RBP22.78■■□□□ 1.24
VARS-220ENST00000461874 PAGR1Q9BTK6 254 aa22.78■■□□□ 1.24
VARS-220ENST00000461874 RABGAP1Q9Y3P9 1069 aa22.78■■□□□ 1.24
VARS-220ENST00000461874 RNF113AO15541 343 aaKnown RBP22.77■■□□□ 1.24
VARS-220ENST00000461874 SGPL1O95470 568 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 AKR1B1P15121 316 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 CDK8P49336 464 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 CTR9Q6PD62 1173 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 C16orf86Q6ZW13 317 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 CCDC17Q96LX7 622 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 CRBNQ96SW2 442 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 PORCNQ9H237 461 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 RPAP3Q9H6T3 665 aaPredicted RBP22.77■■□□□ 1.24
VARS-220ENST00000461874 TTC41PQ6P2S7 1318 aa22.77■■□□□ 1.24
VARS-220ENST00000461874 CNMDO75829 334 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 HMGCRP04035 888 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 LBX2Q6XYB7 198 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 UBE2Q1Q7Z7E8 422 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 APPBP2Q92624 585 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 OSBP2Q969R2 916 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
VARS-220ENST00000461874 NUDT12Q9BQG2 462 aa22.76■■□□□ 1.23
VARS-220ENST00000461874 PAK6Q9NQU5 681 aaPredicted RBP22.76■■□□□ 1.23
VARS-220ENST00000461874 ERC2O15083 957 aa22.75■■□□□ 1.23
VARS-220ENST00000461874 ZFYP08048 801 aaPredicted RBP22.75■■□□□ 1.23
VARS-220ENST00000461874 SIAH1Q8IUQ4 282 aa22.75■■□□□ 1.23
VARS-220ENST00000461874 CCAR1Q8IX12 1150 aaKnown RBP22.75■■□□□ 1.23
VARS-220ENST00000461874 PI4K2BQ8TCG2 481 aa22.75■■□□□ 1.23
VARS-220ENST00000461874 OTUD7AQ8TE49 926 aaPredicted RBP22.75■■□□□ 1.23
VARS-220ENST00000461874 SOCS4Q8WXH5 440 aa22.75■■□□□ 1.23
VARS-220ENST00000461874 MYH7P12883 1935 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 GSG1L2A8MUP6 293 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 XRCC5P13010 732 aaKnown RBP22.74■■□□□ 1.23
VARS-220ENST00000461874 CAPN2P17655 700 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 CYP2B6P20813 491 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 GIMAP6Q6P9H5 292 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 GPR142Q7Z601 462 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 PLEKHH3Q7Z736 793 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 DEFB118Q96PH6 123 aa22.74■■□□□ 1.23
VARS-220ENST00000461874 ARPP21Q9UBL0 812 aaPredicted RBP22.74■■□□□ 1.23
VARS-220ENST00000461874 SPDYE16A6NNV3 312 aaPredicted RBP22.73■■□□□ 1.23
VARS-220ENST00000461874 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
VARS-220ENST00000461874 CCNA1P78396 465 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 ICA1Q05084 483 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 SBK1Q52WX2 424 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 CLEC10AQ8IUN9 316 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 TRIB2Q92519 343 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 USP6NLQ92738 828 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 ARHGEF10LQ9HCE6 1279 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 TMX2Q9Y320 296 aa22.73■■□□□ 1.23
VARS-220ENST00000461874 BAZ2AQ9UIF9 1905 aaKnown RBP22.72■■□□□ 1.23
VARS-220ENST00000461874 SLC34A2O95436 690 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 TRIM32Q13049 653 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 COG2Q14746 738 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 LRRFIP1Q32MZ4 808 aaKnown RBP22.72■■□□□ 1.23
VARS-220ENST00000461874 KIAA1755Q5JYT7 1200 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 MORN1Q5T089 497 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 CRISPLD2Q9H0B8 497 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.72■■□□□ 1.236e-6■■■■□ 23.6
VARS-220ENST00000461874 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
VARS-220ENST00000461874 BTBD7Q9P203 1132 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms