RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 ZNF827Q17R98 1081 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 LETMD1Q6P1Q0 360 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 SLC16A11Q8NCK7 471 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 RIN3Q8TB24 985 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 DHX38Q92620 1227 aaKnown RBP6.61□□□□□ -1.35
CCT4-203ENST00000461540 SYTL4Q96C24 671 aaPredicted RBP6.61□□□□□ -1.35
CCT4-203ENST00000461540 SIRT5Q9NXA8 310 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 CACNA2D2Q9NY47 1150 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 MBD1Q9UIS9 605 aaPredicted RBP6.61□□□□□ -1.35
CCT4-203ENST00000461540 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
CCT4-203ENST00000461540 OR14I1A6ND48 311 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 FSHBP01225 129 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 FCGRTP55899 365 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 ORC1Q13415 861 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 GRM2Q14416 872 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 RTP5Q14D33 572 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 MPRIPQ6WCQ1 1025 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 PPP1R13LQ8WUF5 828 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 CCDC74AQ96AQ1 378 aa6.6□□□□□ -1.35
CCT4-203ENST00000461540 CNOT11Q9UKZ1 510 aaKnown RBP6.6□□□□□ -1.35
CCT4-203ENST00000461540 K7ESM1 405 aa6.59□□□□□ -1.35
CCT4-203ENST00000461540 CILPO75339 1184 aa6.59□□□□□ -1.35
CCT4-203ENST00000461540 TPP2P29144 1249 aaPredicted RBP6.59□□□□□ -1.35
CCT4-203ENST00000461540 SPPL2CQ8IUH8 684 aa6.59□□□□□ -1.35
CCT4-203ENST00000461540 PIWIL2Q8TC59 973 aaKnown RBP6.59□□□□□ -1.35
CCT4-203ENST00000461540 ELMO3Q96BJ8 720 aa6.59□□□□□ -1.35
CCT4-203ENST00000461540 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.35
CCT4-203ENST00000461540 WASH4PA8MWX3 477 aa6.58□□□□□ -1.36
CCT4-203ENST00000461540 HMGA2P52926 109 aa6.58□□□□□ -1.36
CCT4-203ENST00000461540 EGR3Q06889 387 aa6.58□□□□□ -1.36
CCT4-203ENST00000461540 CNKSR3Q6P9H4 555 aa6.58□□□□□ -1.36
CCT4-203ENST00000461540 SORCS2Q96PQ0 1159 aa6.58□□□□□ -1.36
CCT4-203ENST00000461540 TRIT1Q9H3H1 467 aaKnown RBP6.58□□□□□ -1.36
CCT4-203ENST00000461540 N4BP3O15049 544 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 ICMTO60725 284 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 TRIM37O94972 964 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 EPHB3P54753 998 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 SLBPQ14493 270 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCT4-203ENST00000461540 B4GALNT3Q6L9W6 998 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 FBRSQ9HAH7 460 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 EPB41L4AQ9HCS5 686 aaPredicted RBP6.57□□□□□ -1.36
CCT4-203ENST00000461540 DUSP13Q9UII6 198 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 BRPF3Q9ULD4 1205 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
CCT4-203ENST00000461540 PRICKLE3O43900 615 aaPredicted RBP6.56□□□□□ -1.36
CCT4-203ENST00000461540 XRCC5P13010 732 aaKnown RBP6.56□□□□□ -1.36
CCT4-203ENST00000461540 CHRNEQ04844 493 aa6.56□□□□□ -1.36
CCT4-203ENST00000461540 GLYCTKQ8IVS8 523 aa6.56□□□□□ -1.36
CCT4-203ENST00000461540 LINC01356Q8N9X3 169 aa6.56□□□□□ -1.36
CCT4-203ENST00000461540 EGFL7Q9UHF1 273 aa6.56□□□□□ -1.36
CCT4-203ENST00000461540 USTQ9Y2C2 406 aa6.56□□□□□ -1.36
CCT4-203ENST00000461540 PRAMEF27A3QJZ7 478 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 H3BRB1 525 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 HRKO00198 91 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 CAP2P40123 477 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 SERPINB4P48594 390 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 GAB4Q2WGN9 574 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 ADGRF1Q5T601 910 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 MENTQ9BUN1 341 aa6.55□□□□□ -1.36
CCT4-203ENST00000461540 TUT1Q9H6E5 874 aaKnown RBP6.55□□□□□ -1.36
CCT4-203ENST00000461540 MATN3O15232 486 aa6.54□□□□□ -1.36
CCT4-203ENST00000461540 NKG7Q16617 165 aa6.54□□□□□ -1.36
CCT4-203ENST00000461540 GPATCH2Q9NW75 528 aa6.54□□□□□ -1.36
CCT4-203ENST00000461540 AKAP2Q9Y2D5 859 aa6.54□□□□□ -1.36
CCT4-203ENST00000461540 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
CCT4-203ENST00000461540 LTKP29376 864 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 MAGEA10P43363 369 aaPredicted RBP6.53□□□□□ -1.36
CCT4-203ENST00000461540 GALK1P51570 392 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 SHISA4Q96DD7 197 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 DUSP15Q9H1R2 295 aaPredicted RBP6.53□□□□□ -1.36
CCT4-203ENST00000461540 CNTD2Q9H8S5 307 aa6.53□□□□□ -1.36
CCT4-203ENST00000461540 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
CCT4-203ENST00000461540 IRS4O14654 1257 aaPredicted RBP6.52□□□□□ -1.37
CCT4-203ENST00000461540 NDUFB5O43674 189 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 DUSP4Q13115 394 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 PDE3BQ13370 1112 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 UBXN11Q5T124 520 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 ZFYVE27Q5T4F4 411 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 FAM129CQ86XR2 697 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 SIRT2Q8IXJ6 389 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 ANKS4BQ8N8V4 417 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 ARID3AQ99856 593 aa6.52□□□□□ -1.37
CCT4-203ENST00000461540 ETF1P62495 437 aaKnown RBP6.51□□□□□ -1.37
CCT4-203ENST00000461540 PRAMEF13Q5VWM6 474 aa6.51□□□□□ -1.37
CCT4-203ENST00000461540 HID1Q8IV36 788 aa6.51□□□□□ -1.37
CCT4-203ENST00000461540 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
CCT4-203ENST00000461540 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
CCT4-203ENST00000461540 WNT10AQ9GZT5 417 aa6.51□□□□□ -1.37
CCT4-203ENST00000461540 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 CST3P01034 146 aaPredicted RBP6.5□□□□□ -1.37
CCT4-203ENST00000461540 BMP6P22004 513 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 VIPR1P32241 457 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 KCNC1P48547 511 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 OLFML2BQ68BL8 750 aa6.5□□□□□ -1.37
CCT4-203ENST00000461540 LLGL2Q6P1M3 1020 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms