RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 MTMR6Q9Y217 621 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.02
LSG1-205ENST00000461343 YDJCA8MPS7 323 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 PRPF3O43395 683 aaKnown RBP8.64□□□□□ -1.03
LSG1-205ENST00000461343 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 RASA1P20936 1047 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
LSG1-205ENST00000461343 PLCD1P51178 756 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 UBE2HP62256 183 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 CXCL9Q07325 125 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 TROAPQ12815 778 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 NBR1Q14596 966 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 GRIK5Q16478 980 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 KLHL40Q2TBA0 621 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 CERKLQ49MI3 558 aaPredicted RBP8.64□□□□□ -1.03
LSG1-205ENST00000461343 RBM26Q5T8P6 1007 aaKnown RBP8.64□□□□□ -1.03
LSG1-205ENST00000461343 DCAF15Q66K64 600 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 MCTP1Q6DN14 999 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 LARP6Q9BRS8 491 aaKnown RBP8.64□□□□□ -1.03
LSG1-205ENST00000461343 ALG1Q9BT22 464 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 MYOZ2Q9NPC6 264 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 CEP131Q9UPN4 1083 aa8.64□□□□□ -1.03
LSG1-205ENST00000461343 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 NFKBIEO00221 500 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 TRAK2O60296 914 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 PRDM1O75626 825 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 PARP1P09874 1014 aaKnown RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 NOVP48745 357 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 GRM4Q14833 912 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 DPY19L2Q6NUT2 758 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 TATDN1Q6P1N9 297 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 TMTC3Q6ZXV5 915 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 KCNG4Q8TDN1 519 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 DDX11Q96FC9 970 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 CCDC34Q96HJ3 373 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 CSRNP1Q96S65 589 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 SPZ1Q9BXG8 430 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 SLC26A6Q9BXS9 759 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 FOXP1Q9H334 677 aaPredicted RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 NCOA5Q9HCD5 579 aaKnown RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 MTMR4Q9NYA4 1195 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 NYAP2Q9P242 653 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 ZNF70Q9UC06 446 aaPredicted RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 NOL7Q9UMY1 257 aaKnown RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
LSG1-205ENST00000461343 CDK5RAP2Q96SN8 1893 aa8.63□□□□□ -1.03
LSG1-205ENST00000461343 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 MYH8P13535 1937 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 MPHOSPH10O00566 681 aaKnown RBP8.62□□□□□ -1.03
LSG1-205ENST00000461343 JAK2O60674 1132 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 CTDNEP1O95476 244 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 CYP2D6P10635 497 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 GNA11P29992 359 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 ST3GAL1Q11201 340 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 ABCB5Q2M3G0 1257 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 RILPL1Q5EBL4 403 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 FAM47AQ5JRC9 791 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 ARHGAP27Q6ZUM4 889 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 DCAF4Q8WV16 495 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 MKL1Q969V6 931 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 RRP36Q96EU6 259 aaKnown RBP8.62□□□□□ -1.03
LSG1-205ENST00000461343 ZKSCAN3Q9BRR0 538 aa8.62□□□□□ -1.03
LSG1-205ENST00000461343 TDRD3Q9H7E2 651 aaKnown RBP8.62□□□□□ -1.03
LSG1-205ENST00000461343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
LSG1-205ENST00000461343 PITPNM2Q9BZ72 1349 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 YEATS4O95619 227 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 ASNSP08243 561 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 KCNA4P22459 653 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 ADD1P35611 737 aaKnown RBP8.61□□□□□ -1.03
LSG1-205ENST00000461343 TRAPPC10P48553 1259 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 NTRK3Q16288 839 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 CDC37L1Q7L3B6 337 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 STK11IPQ8N1F8 1099 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 GMCL1P1Q8NEA9 526 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 CEP95Q96GE4 821 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 ZBED3Q96IU2 234 aaPredicted RBP8.61□□□□□ -1.03
LSG1-205ENST00000461343 PRMT6Q96LA8 375 aaPredicted RBP8.61□□□□□ -1.03
LSG1-205ENST00000461343 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 MXD3Q9BW11 206 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 FHDC1Q9C0D6 1143 aaPredicted RBP8.61□□□□□ -1.03
LSG1-205ENST00000461343 VEZTQ9HBM0 779 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 GOPCQ9HD26 462 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 DDX4Q9NQI0 724 aaKnown RBP8.61□□□□□ -1.03
LSG1-205ENST00000461343 FAM198AQ9UFP1 575 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 ZDHHC9Q9Y397 364 aa8.61□□□□□ -1.03
LSG1-205ENST00000461343 ZNF646O15015 1829 aaPredicted RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 IGKV6D-41A0A0C4DH26 115 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 KLRF2D3W0D1 207 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 PRPF40AO75400 957 aaKnown RBP8.6□□□□□ -1.03
LSG1-205ENST00000461343 MMP1P03956 469 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 SCG2P13521 617 aa8.6□□□□□ -1.03
LSG1-205ENST00000461343 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms