RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KRT81Q14533 505 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 HERC4Q5GLZ8 1057 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-205ENST00000461221 TTLL3Q9Y4R7 772 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 CHMLP26374 656 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 CTNNA1P35221 906 aaKnown RBP9.92□□□□□ -0.82
BRCA1-205ENST00000461221 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 PDZD8Q8NEN9 1154 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 LRGUKQ96M69 825 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 FAM8A1Q9UBU6 413 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 ESYT2A0FGR8 921 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 TRIM37O94972 964 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 PHEXP78562 749 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 CDR2Q01850 454 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 TRIM50Q86XT4 487 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 MYO1AQ9UBC5 1043 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 IPO11Q9UI26 975 aaKnown RBP9.92□□□□□ -0.82
BRCA1-205ENST00000461221 RIMBP2O15034 1052 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 POLR2DO15514 142 aaKnown RBP9.92□□□□□ -0.82
BRCA1-205ENST00000461221 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 TAB2Q9NYJ8 693 aa9.92□□□□□ -0.82
BRCA1-205ENST00000461221 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 GCNT3O95395 438 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 MYCLP12524 364 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 GCKP35557 465 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 EFCC1Q9HA90 598 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 PPP1R9AQ9ULJ8 1098 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 GSTA1P08263 222 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 GSTA2P09210 222 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 RAD51AP2Q09MP3 1159 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 ANKRD20A4Q4UJ75 823 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 ANKRD20A8PQ5CZ79 823 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 ANKRD20A2Q5SQ80 823 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 ANKRD20A1Q5TYW2 823 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 CEP85Q6P2H3 762 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 MYRIPQ8NFW9 859 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 TRIM58Q8NG06 486 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 IFIH1Q9BYX4 1025 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 CCDC68Q9H2F9 335 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 MRPL44Q9H9J2 332 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 XAB2Q9HCS7 855 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 WWC3Q9ULE0 1092 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 KDM3AQ9Y4C1 1321 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 S100BP04271 92 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 STAG1Q8WVM7 1258 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 SCYL1Q96KG9 808 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 NT5C3AQ9H0P0 336 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 MSH6P52701 1360 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 BAG2O95816 211 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 CALCRLQ16602 461 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 PPME1Q9Y570 386 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 STAM2O75886 525 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 POSTNQ15063 836 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 CHRNA2Q15822 529 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 RUNDC3BQ96NL0 473 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 DRC3Q9H069 523 aa9.91□□□□□ -0.82
BRCA1-205ENST00000461221 DDX41Q9UJV9 622 aaKnown RBP9.91□□□□□ -0.82
BRCA1-205ENST00000461221 EVI5O60447 810 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 DDB1Q16531 1140 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 BSPRYQ5W0U4 402 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 OTUD6AQ7L8S5 288 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 CABP7Q86V35 215 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 CFAP61Q8NHU2 1237 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 TACO1Q9BSH4 297 aaKnown RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 ANGEL1Q9UNK9 670 aaKnown RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 SAR1BQ9Y6B6 198 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 B4E1Z4 1266 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 DIS3L2Q8IYB7 885 aaKnown RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 ZNF526Q8TF50 670 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 RABEP2Q9H5N1 569 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 PCDHB15Q9Y5E8 787 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 CAPN7Q9Y6W3 813 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 PSDA5PKW4 1024 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 SPDYE16A6NNV3 312 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 ATF7P17544 494 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 GNGT1P63211 74 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 APBA1Q02410 837 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 SPDYE2Q495Y8 402 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 CCDC124Q96CT7 223 aaKnown RBP9.9□□□□□ -0.82
BRCA1-205ENST00000461221 USP26Q9BXU7 913 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 PLCH2O75038 1416 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 NOS1P29475 1434 aa9.9□□□□□ -0.82
BRCA1-205ENST00000461221 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.83
BRCA1-205ENST00000461221 SLF1Q9BQI6 1058 aa9.9□□□□□ -0.83
BRCA1-205ENST00000461221 CBX8Q9HC52 389 aa9.9□□□□□ -0.83
BRCA1-205ENST00000461221 MAPK8IP1Q9UQF2 711 aa9.9□□□□□ -0.83
BRCA1-205ENST00000461221 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.83
BRCA1-205ENST00000461221 AOX1Q06278 1338 aa9.9□□□□□ -0.83
BRCA1-205ENST00000461221 STAT1P42224 750 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms