RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL5A3-202ENST00000461214 ESR2Q92731 530 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
COL5A3-202ENST00000461214 MKI67P46013 3256 aaKnown RBP17.01■□□□□ 0.31
COL5A3-202ENST00000461214 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
COL5A3-202ENST00000461214 PSMA5P28066 241 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 NOL9Q5SY16 702 aaKnown RBP17■□□□□ 0.31
COL5A3-202ENST00000461214 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 ARMC9Q7Z3E5 817 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 IL27Q8NEV9 243 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 WRNIP1Q96S55 665 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 MTA3Q9BTC8 594 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 TM6SF1Q9BZW5 370 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 TOMM22Q9NS69 142 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
COL5A3-202ENST00000461214 CERKLQ49MI3 558 aaPredicted RBP16.99■□□□□ 0.31
COL5A3-202ENST00000461214 PPP4R3BQ5MIZ7 849 aa16.99■□□□□ 0.31
COL5A3-202ENST00000461214 TMEM179Q6ZVK1 233 aa16.99■□□□□ 0.31
COL5A3-202ENST00000461214 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
COL5A3-202ENST00000461214 TACC3Q9Y6A5 838 aa16.99■□□□□ 0.31
COL5A3-202ENST00000461214 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 B4E1Z4 1266 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 H0YGN5 161 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 PRDM1O75626 825 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 ASNSP08243 561 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 CAP2P40123 477 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 RRP12Q5JTH9 1297 aaKnown RBP16.98■□□□□ 0.31
COL5A3-202ENST00000461214 MB21D2Q8IYB1 491 aaPredicted RBP16.98■□□□□ 0.31
COL5A3-202ENST00000461214 SCYL3Q8IZE3 742 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 CD99L2Q8TCZ2 262 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 NEK1Q96PY6 1258 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 TMEM106CQ9BVX2 250 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 CFHR5Q9BXR6 569 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
COL5A3-202ENST00000461214 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
COL5A3-202ENST00000461214 RANBP6O60518 1105 aaKnown RBP16.97■□□□□ 0.31
COL5A3-202ENST00000461214 KDM4AO75164 1064 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 USP2O75604 605 aaPredicted RBP16.97■□□□□ 0.31
COL5A3-202ENST00000461214 TSPY3P0CV98 308 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 TSPY8P0CW00 308 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 MCM5P33992 734 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 ANKRD13AQ8IZ07 590 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 STK11IPQ8N1F8 1099 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 NEDD1Q8NHV4 660 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
COL5A3-202ENST00000461214 TBC1D2Q9BYX2 928 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 ZBTB21Q9ULJ3 1066 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 CSADQ9Y600 493 aa16.97■□□□□ 0.31
COL5A3-202ENST00000461214 ALDH1A1P00352 501 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 MYCP01106 439 aaPredicted RBP16.96■□□□□ 0.31
COL5A3-202ENST00000461214 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 AKR1B1P15121 316 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 SART3Q15020 963 aaKnown RBP16.96■□□□□ 0.31
COL5A3-202ENST00000461214 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 BLOC1S2Q6QNY1 142 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 CHRDL2Q6WN34 429 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
COL5A3-202ENST00000461214 RBBP6Q7Z6E9 1792 aaKnown RBP16.96■□□□□ 0.31
COL5A3-202ENST00000461214 COL11A1P12107 1806 aaPredicted RBP16.96■□□□□ 0.3
COL5A3-202ENST00000461214 IGKV6D-41A0A0C4DH26 115 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 GDF11O95390 407 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 CASTP20810 708 aaKnown RBP16.95■□□□□ 0.3
COL5A3-202ENST00000461214 INPP5BP32019 993 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 TFAP4Q01664 338 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 VGLL4Q14135 290 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 LDLRAD1Q5T700 205 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 SPRYD7Q5W111 196 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 IFNL1Q8IU54 200 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 TMEM87BQ96K49 555 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 UBAC1Q9BSL1 405 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 PICK1Q9NRD5 415 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 A0A0G2JMZ2 1700 aa16.95■□□□□ 0.3
COL5A3-202ENST00000461214 KIAA0100Q14667 2235 aaKnown RBP16.94■□□□□ 0.3
COL5A3-202ENST00000461214 RLFQ13129 1914 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 MPHOSPH10O00566 681 aaKnown RBP16.94■□□□□ 0.3
COL5A3-202ENST00000461214 GH2P01242 217 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 RPS6KB1P23443 525 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
COL5A3-202ENST00000461214 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
COL5A3-202ENST00000461214 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
COL5A3-202ENST00000461214 ARMC5Q96C12 935 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 KANSL2Q9H9L4 492 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 EFCC1Q9HA90 598 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 INCENPQ9NQS7 918 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 CYP46A1Q9Y6A2 500 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 SNCAIPQ9Y6H5 919 aa16.94■□□□□ 0.3
COL5A3-202ENST00000461214 TNKSO95271 1327 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms