RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 CERKLQ49MI3 558 aaPredicted RBP11.67□□□□□ -0.54
CD40-203ENST00000461171 USP17L2Q6R6M4 530 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 ACER1Q8TDN7 264 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 COA7Q96BR5 231 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 UNC93B1Q9H1C4 597 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 TRIOBPQ9H2D6 2365 aa11.67□□□□□ -0.54
CD40-203ENST00000461171 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
CD40-203ENST00000461171 PEX10O60683 326 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 VCAM1P19320 739 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 UBXN2AP68543 259 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 SLC44A5Q8NCS7 719 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 NKX2-3Q8TAU0 364 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 U2AF1L4Q8WU68 220 aaKnown RBP11.66□□□□□ -0.54
CD40-203ENST00000461171 FEZ1Q99689 392 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 ATP8A2Q9NTI2 1148 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 RBPJLQ9UBG7 517 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
CD40-203ENST00000461171 SMIM22K7EJ46 135 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 USP14P54578 494 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
CD40-203ENST00000461171 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 GPRC5AQ8NFJ5 357 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 GTF3C2Q8WUA4 911 aaPredicted RBP11.65□□□□□ -0.54
CD40-203ENST00000461171 DYNLL2Q96FJ2 89 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 PUS7LQ9H0K6 701 aaKnown RBP11.65□□□□□ -0.54
CD40-203ENST00000461171 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 PAK6Q9NQU5 681 aaPredicted RBP11.65□□□□□ -0.54
CD40-203ENST00000461171 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
CD40-203ENST00000461171 SWAP70Q9UH65 585 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 A0A0G2JMZ2 1700 aa11.65□□□□□ -0.54
CD40-203ENST00000461171 MYH8P13535 1937 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 CNMDO75829 334 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 HMGCRP04035 888 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 ERVK-9P63128 1117 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 ERVK-24P63145 666 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
CD40-203ENST00000461171 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 TSHZ3Q63HK5 1081 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 SOCS4Q8WXH5 440 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 USP6NLQ92738 828 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 PORCNQ9H237 461 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 RLFQ13129 1914 aa11.64□□□□□ -0.55
CD40-203ENST00000461171 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
CD40-203ENST00000461171 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 USP17L12C9JPN9 530 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 USP17L21D6R901 530 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 SGPL1O95470 568 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 MAPK4P31152 587 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 Q3C1V9 767 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 MAP3K21Q5TCX8 1036 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 ZSCAN25Q6NSZ9 544 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 TMEM179Q6ZVK1 233 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 SIAH1Q8IUQ4 282 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 TRIB2Q92519 343 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 CRISPLD2Q9H0B8 497 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 RABGAP1Q9Y3P9 1069 aa11.63□□□□□ -0.55
CD40-203ENST00000461171 RANBP2P49792 3224 aaKnown RBP11.63□□□□□ -0.55
CD40-203ENST00000461171 SPDYE16A6NNV3 312 aaPredicted RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 FARP2O94887 1054 aaPredicted RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 XRCC5P13010 732 aaKnown RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 AKR1B1P15121 316 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 MORN1Q5T089 497 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 C16orf86Q6ZW13 317 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 GPR142Q7Z601 462 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 PI4K2BQ8TCG2 481 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 OTUD7AQ8TE49 926 aaPredicted RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 DEFB118Q96PH6 123 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 STRBPQ96SI9 672 aaKnown RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 PAGR1Q9BTK6 254 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 RPAP3Q9H6T3 665 aaPredicted RBP11.62□□□□□ -0.55
CD40-203ENST00000461171 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
CD40-203ENST00000461171 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
CD40-203ENST00000461171 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
CD40-203ENST00000461171 MPHOSPH10O00566 681 aaKnown RBP11.61□□□□□ -0.55
CD40-203ENST00000461171 CAPN2P17655 700 aa11.61□□□□□ -0.55
CD40-203ENST00000461171 CDK8P49336 464 aa11.61□□□□□ -0.55
CD40-203ENST00000461171 ICA1Q05084 483 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms