RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 RILPL2Q969X0 211 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 DDRGK1Q96HY6 314 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 SALL3Q9BXA9 1300 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 ZNF532Q9HCE3 1301 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 MGAMO43451 1857 aa15.05■□□□□ -0
HDAC4-207ENST00000461113 MYH13Q9UKX3 1938 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
HDAC4-207ENST00000461113 ENTPD3O75355 529 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
HDAC4-207ENST00000461113 ADD2P35612 726 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 USP5P45974 858 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 TREML2Q5T2D2 321 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 ZFPM1Q8IX07 1006 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 FAM122AQ96E09 287 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 IDI2Q9BXS1 227 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 CRNKL1Q9BZJ0 848 aaKnown RBP15.04■□□□□ -0
HDAC4-207ENST00000461113 FAM198AQ9UFP1 575 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 AGTPBP1Q9UPW5 1226 aa15.04■□□□□ -0
HDAC4-207ENST00000461113 LAMA2P24043 3122 aaKnown RBP15.04■□□□□ -0
HDAC4-207ENST00000461113 PRUNE2Q8WUY3 3088 aa15.03■□□□□ -0
HDAC4-207ENST00000461113 DDX60LQ5H9U9 1706 aaKnown RBP15.03■□□□□ -0
HDAC4-207ENST00000461113 FOSL2P15408 326 aa15.03■□□□□ -0
HDAC4-207ENST00000461113 PICALMQ13492 652 aa15.03■□□□□ -0
HDAC4-207ENST00000461113 MAP3K21Q5TCX8 1036 aa15.03■□□□□ -0
HDAC4-207ENST00000461113 HIP1O00291 1037 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
HDAC4-207ENST00000461113 CYP2B6P20813 491 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 RGS3P49796 1198 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 TJAP1Q5JTD0 557 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 CCDC84Q86UT8 332 aaPredicted RBP15.02■□□□□ -0
HDAC4-207ENST00000461113 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 SH3RF3Q8TEJ3 882 aaPredicted RBP15.02■□□□□ -0
HDAC4-207ENST00000461113 ZNF384Q8TF68 577 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 APPBP2Q92624 585 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 TTYH1Q9H313 450 aaPredicted RBP15.02■□□□□ -0
HDAC4-207ENST00000461113 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.02■□□□□ -0
HDAC4-207ENST00000461113 PNMA3Q9UL41 463 aa15.02■□□□□ -0
HDAC4-207ENST00000461113 PDE4AP27815 886 aa15.01□□□□□ -0.01
HDAC4-207ENST00000461113 RHBDL3P58872 404 aa15.01□□□□□ -0.01
HDAC4-207ENST00000461113 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
HDAC4-207ENST00000461113 TRIM34Q9BYJ4 488 aa15.01□□□□□ -0.01
HDAC4-207ENST00000461113 ATRNL1Q5VV63 1379 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 MUC3AQ02505 3323 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 TMEM265A0A087WTH1 108 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 TCRBV5S4A2TA0A5A2 114 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 MBD4O95243 580 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 HLA-DOAP06340 250 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 SLURP2P0DP57 97 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 GCLCP48506 637 aaPredicted RBP15□□□□□ -0.01
HDAC4-207ENST00000461113 DYNLL1P63167 89 aaKnown RBP15□□□□□ -0.01
HDAC4-207ENST00000461113 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
HDAC4-207ENST00000461113 SHHQ15465 462 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 TTC22Q5TAA0 569 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 LHX8Q68G74 356 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 ADGRA1Q86SQ6 560 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 DHX36Q9H2U1 1008 aaKnown RBP15□□□□□ -0.01
HDAC4-207ENST00000461113 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
HDAC4-207ENST00000461113 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
HDAC4-207ENST00000461113 GNAT2P19087 354 aa14.99□□□□□ -0.01
HDAC4-207ENST00000461113 MFAP1P55081 439 aaKnown RBP14.99□□□□□ -0.01
HDAC4-207ENST00000461113 C9orf50Q5SZB4 431 aa14.99□□□□□ -0.01
HDAC4-207ENST00000461113 MAPKAPK5Q8IW41 473 aa14.99□□□□□ -0.01
HDAC4-207ENST00000461113 SENP6Q9GZR1 1112 aaPredicted RBP14.99□□□□□ -0.01
HDAC4-207ENST00000461113 CCND3P30281 292 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-207ENST00000461113 TTC6Q86TZ1 520 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 RIOK1Q9BRS2 568 aaKnown RBP14.98□□□□□ -0.01
HDAC4-207ENST00000461113 NACAP1Q9BZK3 213 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 OSBPL5Q9H0X9 879 aaPredicted RBP14.98□□□□□ -0.01
HDAC4-207ENST00000461113 ARMT1Q9H993 441 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 HELLSQ9NRZ9 838 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 PRKAG2Q9UGJ0 569 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
HDAC4-207ENST00000461113 APPP05067 770 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 POLR3DP05423 398 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 SMAD3P84022 425 aaKnown RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 SH3BP5LQ7L8J4 393 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 LCORLQ8N3X6 602 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 USP38Q8NB14 1042 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
HDAC4-207ENST00000461113 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 PI4KBQ9UBF8 816 aa14.97□□□□□ -0.01
HDAC4-207ENST00000461113 FLT1P17948 1338 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 GPAA1O43292 621 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 XRCC5P13010 732 aaKnown RBP14.96□□□□□ -0.01
HDAC4-207ENST00000461113 SDSP20132 328 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 HOXD11P31277 338 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-207ENST00000461113 MAP3K10Q02779 954 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 MCMDC2Q4G0Z9 681 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 ZMYM1Q5SVZ6 1142 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 FOXP4Q8IVH2 680 aaPredicted RBP14.96□□□□□ -0.01
HDAC4-207ENST00000461113 OSBP2Q969R2 916 aa14.96□□□□□ -0.01
HDAC4-207ENST00000461113 PUS7LQ9H0K6 701 aaKnown RBP14.96□□□□□ -0.01
HDAC4-207ENST00000461113 ASCC2Q9H1I8 757 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms