RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 TMEM151AQ8N4L1 468 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 NEDD1Q8NHV4 660 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 KLHDC4Q8TBB5 520 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 RHPN1Q8TCX5 695 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 PSMD1Q99460 953 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 CFHR5Q9BXR6 569 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 PUS3Q9BZE2 481 aaKnown RBP7.26□□□□□ -1.25
NUP98-208ENST00000461047 TAOK3Q9H2K8 898 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 ALG2Q9H553 416 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 EXOC6BQ9Y2D4 811 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 NRXN2Q9P2S2 1712 aa7.26□□□□□ -1.25
NUP98-208ENST00000461047 BACH1O14867 736 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 TAF5LO75529 589 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 ARHGEF15O94989 841 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 HIBADHP31937 336 aaKnown RBP7.25□□□□□ -1.25
NUP98-208ENST00000461047 MAP2K3P46734 347 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 NCOA4Q13772 614 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 ATG9AQ7Z3C6 839 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 AACSQ86V21 672 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 SMC5Q8IY18 1101 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 NIM1KQ8IY84 436 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 LARGE2Q8N3Y3 721 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 TBC1D16Q8TBP0 767 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 C7orf43Q8WVR3 580 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 RTFDC1Q9BY42 306 aaPredicted RBP7.25□□□□□ -1.25
NUP98-208ENST00000461047 BCL11AQ9H165 835 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 LTBP3Q9NS15 1303 aa7.25□□□□□ -1.25
NUP98-208ENST00000461047 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 ERC2O15083 957 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 GDF11O95390 407 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 UQCRFS1P1P0C7P4 283 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 BCRP11274 1271 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 LMNB1P20700 586 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 EIF6P56537 245 aaKnown RBP7.24□□□□□ -1.25
NUP98-208ENST00000461047 GTF2IP78347 998 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 TMEM132AQ24JP5 1023 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 TNNI3KQ59H18 835 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 FIGNL1Q6PIW4 674 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 C15orf52Q6ZUT6 534 aaKnown RBP7.24□□□□□ -1.25
NUP98-208ENST00000461047 PODNQ7Z5L7 613 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 C1orf216Q8TAB5 229 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 COA1Q9GZY4 146 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 FPGT-TNNI3KV9GXZ4 949 aa7.24□□□□□ -1.25
NUP98-208ENST00000461047 LRP5O75197 1615 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 A6NJY4 79 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 USP17L5A8MUK1 530 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 SASH1O94885 1247 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 IGHDP01880 384 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 IRS1P35568 1242 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 IARSP41252 1262 aaKnown RBP7.23□□□□□ -1.25
NUP98-208ENST00000461047 TIMM10P62072 90 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 NUCB1Q02818 461 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 RASSF7Q02833 373 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 KIAA2012Q0VF49 1180 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 TNIP1Q15025 636 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 LRRFIP1Q32MZ4 808 aaKnown RBP7.23□□□□□ -1.25
NUP98-208ENST00000461047 ARSJQ5FYB0 599 aaPredicted RBP7.23□□□□□ -1.25
NUP98-208ENST00000461047 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 CHD1LQ86WJ1 897 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 TRIM50Q86XT4 487 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 IL1RAPL2Q9NP60 686 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 POLLQ9UGP5 575 aa7.23□□□□□ -1.25
NUP98-208ENST00000461047 ATXN7L1Q9ULK2 861 aaPredicted RBP7.23□□□□□ -1.25
NUP98-208ENST00000461047 N4BP2Q86UW6 1770 aaPredicted RBP7.23□□□□□ -1.25
NUP98-208ENST00000461047 MED23Q9ULK4 1368 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 CDK2AP1O14519 115 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 SPTY2D1Q68D10 685 aaPredicted RBP7.22□□□□□ -1.25
NUP98-208ENST00000461047 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 ZGPATQ8N5A5 531 aaKnown RBP7.22□□□□□ -1.25
NUP98-208ENST00000461047 VGLL2Q8N8G2 317 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 WDR66Q8TBY9 1149 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 TBC1D22AQ8WUA7 517 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 OXCT2Q9BYC2 517 aaPredicted RBP7.22□□□□□ -1.25
NUP98-208ENST00000461047 CRISPLD1Q9H336 500 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 DENND2AQ9ULE3 1009 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 ZNRF3Q9ULT6 936 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 GTF3C3Q9Y5Q9 886 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 GJA3Q9Y6H8 435 aa7.22□□□□□ -1.25
NUP98-208ENST00000461047 LAMB2P55268 1798 aa7.21□□□□□ -1.25
NUP98-208ENST00000461047 PHF20L1A8MW92 1017 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 TMEM229AB2RXF0 380 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 IGSF3O75054 1194 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 GLRX3O76003 335 aaKnown RBP7.21□□□□□ -1.26
NUP98-208ENST00000461047 BMP4P12644 408 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.26
NUP98-208ENST00000461047 FGFR2P21802 821 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 MMP14P50281 582 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 TTF1Q15361 905 aaPredicted RBP7.21□□□□□ -1.26
NUP98-208ENST00000461047 AOC3Q16853 763 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 CCDC102BQ68D86 513 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 KANK3Q6NY19 840 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 OLFM4Q6UX06 510 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 FBXO33Q7Z6M2 555 aa7.21□□□□□ -1.26
NUP98-208ENST00000461047 ACDQ96AP0 544 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms