RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 MPHOSPH10O00566 681 aaKnown RBP12.75□□□□□ -0.37
CSDC2-202ENST00000460790 PPP2R5BQ15173 497 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 TMEM179Q6ZVK1 233 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
CSDC2-202ENST00000460790 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 TMEM47Q9BQJ4 181 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
CSDC2-202ENST00000460790 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
CSDC2-202ENST00000460790 NID2Q14112 1375 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 DHX16O60231 1041 aaKnown RBP12.74□□□□□ -0.37
CSDC2-202ENST00000460790 GDF11O95390 407 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 TTLL1O95922 423 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 CALM1P0DP23 149 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 CALM2P0DP24 149 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 CALM3P0DP25 149 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
CSDC2-202ENST00000460790 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 DDIT3P35638 169 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 METAP2P50579 478 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSDC2-202ENST00000460790 TROAPQ12815 778 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 SUPT20HL1Q3ZLR7 823 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 DCAF15Q66K64 600 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 MICU3Q86XE3 530 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 MKL1Q969V6 931 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 MAP3K14Q99558 947 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 MYL10Q9BUA6 226 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 KANSL2Q9H9L4 492 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 NCOA5Q9HCD5 579 aaKnown RBP12.74□□□□□ -0.37
CSDC2-202ENST00000460790 FAM217BQ9NTX9 383 aaPredicted RBP12.74□□□□□ -0.37
CSDC2-202ENST00000460790 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
CSDC2-202ENST00000460790 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
CSDC2-202ENST00000460790 MYH6P13533 1939 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 DDAH1O94760 285 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 CTDNEP1O95476 244 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 GH2P01242 217 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
CSDC2-202ENST00000460790 RXRAP19793 462 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 CDC27P30260 824 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
CSDC2-202ENST00000460790 CAP2P40123 477 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 JAG1P78504 1218 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 SEPT2Q15019 361 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
CSDC2-202ENST00000460790 EAPPQ56P03 285 aaPredicted RBP12.73□□□□□ -0.37
CSDC2-202ENST00000460790 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 NUP133Q8WUM0 1156 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 RRAGCQ9HB90 399 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 GINM1Q9NU53 330 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
CSDC2-202ENST00000460790 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
CSDC2-202ENST00000460790 GJB2P29033 226 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 NTRK3Q16288 839 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 RTN1Q16799 776 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 SIAH1Q8IUQ4 282 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
CSDC2-202ENST00000460790 ZNF341Q9BYN7 854 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
CSDC2-202ENST00000460790 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
CSDC2-202ENST00000460790 ADM5C9JUS6 153 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 CPLX1O14810 134 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 EEF2P13639 858 aaKnown RBP12.71□□□□□ -0.37
CSDC2-202ENST00000460790 RAB3GAP1Q15042 981 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 CPLX2Q6PUV4 134 aaKnown RBP12.71□□□□□ -0.37
CSDC2-202ENST00000460790 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 CLEC10AQ8IUN9 316 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.37
CSDC2-202ENST00000460790 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
CSDC2-202ENST00000460790 JAK2O60674 1132 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 DTNBO60941 627 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
CSDC2-202ENST00000460790 CDKL5O76039 1030 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 ASNSP08243 561 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 IFNAR1P17181 557 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 KIF5BP33176 963 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 HMGN5P82970 282 aaKnown RBP12.7□□□□□ -0.38
CSDC2-202ENST00000460790 ICA1Q05084 483 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 GRM4Q14833 912 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
CSDC2-202ENST00000460790 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 CHMP5Q9NZZ3 219 aa12.7□□□□□ -0.38
CSDC2-202ENST00000460790 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms