RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 VIL1P09327 827 aaKnown RBP19.57■□□□□ 0.72
YIPF3-205ENST00000460547 U2AF2P26368 475 aaKnown RBP eCLIP19.57■□□□□ 0.72
YIPF3-205ENST00000460547 TRIM29Q14134 588 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 NBPF11Q86T75 865 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 FANCBQ8NB91 859 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 AIFM3Q96NN9 605 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 SLC26A6Q9BXS9 759 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 CD209Q9NNX6 404 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 GJB4Q9NTQ9 266 aa19.57■□□□□ 0.72
YIPF3-205ENST00000460547 MKRN1Q9UHC7 482 aaKnown RBP19.57■□□□□ 0.72
YIPF3-205ENST00000460547 LDHCP07864 332 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 ADALQ6DHV7 355 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CCDC73Q6ZRK6 1079 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CCAR1Q8IX12 1150 aaKnown RBP19.56■□□□□ 0.72
YIPF3-205ENST00000460547 USP17L3A6NCW0 530 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 USP17L4A6NCW7 530 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 SMIM22K7EJ46 135 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 DEXIO95424 95 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CALM1P0DP23 149 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CALM2P0DP24 149 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CALM3P0DP25 149 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 ME1P48163 572 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 USP17L1Q7RTZ2 530 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 MICALL2Q8IY33 904 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 CRACR2BQ8N4Y2 399 aaPredicted RBP19.56■□□□□ 0.72
YIPF3-205ENST00000460547 ENGASEQ8NFI3 743 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
YIPF3-205ENST00000460547 MROH7-TTC4A0A0A0MT08 1334 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 ESPNB1AK53 854 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 DDAH1O94760 285 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 BAG3O95817 575 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 POLR3DP05423 398 aaPredicted RBP19.55■□□□□ 0.72
YIPF3-205ENST00000460547 TYRO3Q06418 890 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 STK38Q15208 465 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 ANO1Q5XXA6 986 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 RNF26Q9BY78 433 aaPredicted RBP19.55■□□□□ 0.72
YIPF3-205ENST00000460547 GOLPH3LQ9H4A5 285 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 RRAGDQ9NQL2 400 aaPredicted RBP19.55■□□□□ 0.72
YIPF3-205ENST00000460547 PCDHA7Q9UN72 937 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 CLIC4Q9Y696 253 aa19.55■□□□□ 0.72
YIPF3-205ENST00000460547 PDE4BQ07343 736 aa19.54■□□□□ 0.72
YIPF3-205ENST00000460547 SNW1Q13573 536 aaKnown RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 IFIT1BQ5T764 474 aaKnown RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 MAP1SQ66K74 1059 aaPredicted RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 RSBN1LQ6PCB5 846 aaPredicted RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 STK11IPQ8N1F8 1099 aa19.54■□□□□ 0.72
YIPF3-205ENST00000460547 MRPS27Q92552 414 aaKnown RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 RBM28Q9NW13 759 aaKnown RBP19.54■□□□□ 0.72
YIPF3-205ENST00000460547 JAG2Q9Y219 1238 aa19.54■□□□□ 0.72
YIPF3-205ENST00000460547 SPTLC2O15270 562 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 CAMK4Q16566 473 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 FSIP1Q8NA03 581 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 FAM200AQ8TCP9 573 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 MRVI1Q9Y6F6 885 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 FAM205AQ6ZU69 1335 aa19.53■□□□□ 0.72
YIPF3-205ENST00000460547 CAVIN2O95810 425 aa19.52■□□□□ 0.72
YIPF3-205ENST00000460547 MMP1P03956 469 aa19.52■□□□□ 0.72
YIPF3-205ENST00000460547 C12orf60Q5U649 245 aa19.52■□□□□ 0.72
YIPF3-205ENST00000460547 TBC1D22AQ8WUA7 517 aa19.52■□□□□ 0.72
YIPF3-205ENST00000460547 NOL10Q9BSC4 688 aaKnown RBP19.52■□□□□ 0.72
YIPF3-205ENST00000460547 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.52■□□□□ 0.72
YIPF3-205ENST00000460547 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.72
YIPF3-205ENST00000460547 DDX60LQ5H9U9 1706 aaKnown RBP19.52■□□□□ 0.72
YIPF3-205ENST00000460547 FUT2Q10981 343 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 TROAPQ12815 778 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 SLC39A14Q15043 492 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.71
YIPF3-205ENST00000460547 GRIK5Q16478 980 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 RBM26Q5T8P6 1007 aaKnown RBP19.52■□□□□ 0.71
YIPF3-205ENST00000460547 STRIP1Q5VSL9 837 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 FAM163AQ96GL9 167 aaPredicted RBP19.52■□□□□ 0.71
YIPF3-205ENST00000460547 RTN4Q9NQC3 1192 aaKnown RBP19.52■□□□□ 0.71
YIPF3-205ENST00000460547 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 MYH2Q9UKX2 1941 aa19.52■□□□□ 0.71
YIPF3-205ENST00000460547 SHTN1A0MZ66 631 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 KINO60870 393 aaKnown RBP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 PPP6R2O75170 966 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 PRDM1O75626 825 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 ITGBL1O95965 494 aaPredicted RBP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 CYP2D6P10635 497 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 SAFBQ15424 915 aaKnown RBP eCLIP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 SAMD7Q7Z3H4 446 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 CKAP2LQ8IYA6 745 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 FMR1NBQ8N0W7 255 aaPredicted RBP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 SH3RF3Q8TEJ3 882 aaPredicted RBP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
YIPF3-205ENST00000460547 FOXP1Q9H334 677 aaPredicted RBP19.51■□□□□ 0.71
YIPF3-205ENST00000460547 PLCG2P16885 1265 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 GUCY1A2P33402 732 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 CLCN1P35523 988 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 USP5P45974 858 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 HTRA3P83110 453 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 GNL2Q13823 731 aaKnown RBP19.5■□□□□ 0.71
YIPF3-205ENST00000460547 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
YIPF3-205ENST00000460547 ZSCAN30Q86W11 494 aa19.5■□□□□ 0.71
YIPF3-205ENST00000460547 NOSTRINQ8IVI9 506 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms