RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 CXCL11O14625 94 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 GPAA1O43292 621 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 PTPRAP18433 802 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 CAP2P40123 477 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 FASTKD5Q7L8L6 764 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 NACAP1Q9BZK3 213 aa12.4□□□□□ -0.42
HLA-DQB1-207ENST00000460185 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 HIP1O00291 1037 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 APPP05067 770 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TDO2P48775 406 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 NOM1Q5C9Z4 860 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 DNAJC18Q9H819 358 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ZBTB21Q9ULJ3 1066 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TRIM75PA6NK02 468 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 OSBP2Q969R2 916 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 STRBPQ96SI9 672 aaKnown RBP12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ZNF287Q9HBT7 754 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ZFYVE28Q9HCC9 887 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MGAMO43451 1857 aa12.38□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GREB1LQ9C091 1923 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 USP17L12C9JPN9 530 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 USP17L21D6R901 530 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 M0R2C6 588 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PRKAB2O43741 272 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GDF11O95390 407 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TBC1D8O95759 1140 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CHGBP05060 677 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PARK7Q99497 189 aaKnown RBP12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 FEZ1Q99689 392 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 NAPBQ9H115 298 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 DIAPH3Q9NSV4 1193 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PNMA3Q9UL41 463 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 AFG3L2Q9Y4W6 797 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GPR25O00155 361 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 FKTNO75072 461 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SLC34A2O95436 690 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 NUDT7P0C024 238 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PLCD1P51178 756 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CRHR2Q13324 411 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SBK1Q52WX2 424 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CCDC136Q96JN2 1154 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GSG1L2A8MUP6 293 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GH2P01242 217 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SHMT1P34896 483 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 GABPAQ06546 454 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SPP2Q13103 211 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 RAB3GAP1Q15042 981 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ARHGEF6Q15052 776 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MCMDC2Q4G0Z9 681 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 COL13A1Q5TAT6 717 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 C16orf86Q6ZW13 317 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PTPN18Q99952 460 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 AGTPBP1Q9UPW5 1226 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
HLA-DQB1-207ENST00000460185 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
HLA-DQB1-207ENST00000460185 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
HLA-DQB1-207ENST00000460185 PDHXO00330 501 aa12.34□□□□□ -0.43
HLA-DQB1-207ENST00000460185 CYP2D6P10635 497 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms