RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 USP40Q9NVE5 1235 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
HERC4-207ENST00000460168 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
HERC4-207ENST00000460168 GOLGA8AA7E2F4 631 aa12□□□□□ -0.49
HERC4-207ENST00000460168 H3BQV1 296 aa12□□□□□ -0.49
HERC4-207ENST00000460168 F13A1P00488 732 aa12□□□□□ -0.49
HERC4-207ENST00000460168 PTGER2P43116 358 aa12□□□□□ -0.49
HERC4-207ENST00000460168 FAM47AQ5JRC9 791 aa12□□□□□ -0.49
HERC4-207ENST00000460168 IFFO2Q5TF58 517 aa12□□□□□ -0.49
HERC4-207ENST00000460168 DYNLL2Q96FJ2 89 aa12□□□□□ -0.49
HERC4-207ENST00000460168 ZNF287Q9HBT7 754 aa12□□□□□ -0.49
HERC4-207ENST00000460168 MTMR6Q9Y217 621 aa12□□□□□ -0.49
HERC4-207ENST00000460168 BCS1LQ9Y276 419 aa12□□□□□ -0.49
HERC4-207ENST00000460168 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
HERC4-207ENST00000460168 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
HERC4-207ENST00000460168 RAD17O75943 681 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 APOBEC3HQ6NTF7 200 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 CPLX2Q6PUV4 134 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 VPS33BQ9H267 617 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 MYH1P12882 1939 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 ZNF646O15015 1829 aaPredicted RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 FOCADQ5VW36 1801 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 IARSP41252 1262 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 HDLBPQ00341 1268 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 CHAMP1Q96JM3 812 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 MRIQ9BWK5 157 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 PANK2Q9BZ23 570 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 BRMS1Q9HCU9 246 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 SERPINA10Q9UK55 444 aa11.99□□□□□ -0.49
HERC4-207ENST00000460168 DDX60LQ5H9U9 1706 aaKnown RBP11.99□□□□□ -0.49
HERC4-207ENST00000460168 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.98□□□□□ -0.49
HERC4-207ENST00000460168 WDHD1O75717 1129 aaPredicted RBP11.98□□□□□ -0.49
HERC4-207ENST00000460168 CDKL5O76039 1030 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 SEC23AQ15436 765 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 ZNF654Q8IZM8 581 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 ZNF444Q8N0Y2 327 aaPredicted RBP11.98□□□□□ -0.49
HERC4-207ENST00000460168 SLC44A5Q8NCS7 719 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 NUP133Q8WUM0 1156 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 MYO3BQ8WXR4 1341 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 PSMD14O00487 310 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 CDC27P30260 824 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 NT5C2P49902 561 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 FOSBP53539 338 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 TFAP4Q01664 338 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
HERC4-207ENST00000460168 PSME4Q14997 1843 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 NMT2O60551 498 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 MYBPC2Q14324 1141 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
HERC4-207ENST00000460168 CATIPQ7Z7H3 387 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 TTC6Q86TZ1 520 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 CALR3Q96L12 384 aaKnown RBP11.97□□□□□ -0.49
HERC4-207ENST00000460168 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
HERC4-207ENST00000460168 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
HERC4-207ENST00000460168 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 PCDHAC2Q9Y5I4 1007 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 COL4A5P29400 1685 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
HERC4-207ENST00000460168 CCDC196A0A1B0GTZ2 297 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 TRAK2O60296 914 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 CDK8P49336 464 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 RCAN1P53805 252 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 CBX1P83916 185 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 RTN1Q16799 776 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 C16orf86Q6ZW13 317 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 OGFOD1Q8N543 542 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 OSBPL5Q9H0X9 879 aaPredicted RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 ECM29Q5VYK3 1845 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 SRCAPQ6ZRS2 3230 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 VIL1P09327 827 aaKnown RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 FDPSP14324 419 aaKnown RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 NOP2P46087 812 aaKnown RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 CACNB3P54284 484 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 NFIAQ12857 509 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 ZNF771Q7L3S4 317 aaPredicted RBP11.96□□□□□ -0.49
HERC4-207ENST00000460168 FANCBQ8NB91 859 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 SPON1Q9HCB6 807 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 CALCOCO1Q9P1Z2 691 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.49
HERC4-207ENST00000460168 PRPF40AO75400 957 aaKnown RBP11.95□□□□□ -0.5
HERC4-207ENST00000460168 HLA-DOAP06340 250 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 RASA1P20936 1047 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 CFAP100Q494V2 611 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 ZC3H12AQ5D1E8 599 aaKnown RBP11.95□□□□□ -0.5
HERC4-207ENST00000460168 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 PHKBQ93100 1093 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms