RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 SLC7A5Q01650 507 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 RASGRF1Q13972 1273 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 ADGRE1Q14246 886 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 NCAPHQ15003 741 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 KIAA1211LQ6NV74 962 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 ARMCX6Q7L4S7 300 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 SLC6A18Q96N87 628 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 SEMA6CQ9H3T2 930 aa8.12□□□□□ -1.11
CCDC50-203ENST00000460064 UBOX5O94941 541 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 BMP3P12645 472 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 MBTPS1Q14703 1052 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 SGO2Q562F6 1265 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 SDE2Q6IQ49 451 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 ALYREFQ86V81 257 aaKnown RBP8.11□□□□□ -1.11
CCDC50-203ENST00000460064 JAZF1Q86VZ6 243 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 TMEM192Q8IY95 271 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 CYB5D2Q8WUJ1 264 aa8.11□□□□□ -1.11
CCDC50-203ENST00000460064 UTP4Q969X6 686 aaKnown RBP8.11□□□□□ -1.11
CCDC50-203ENST00000460064 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
CCDC50-203ENST00000460064 ZNF214Q9UL59 606 aaPredicted RBP8.11□□□□□ -1.11
CCDC50-203ENST00000460064 MRPL42Q9Y6G3 142 aaKnown RBP8.11□□□□□ -1.11
CCDC50-203ENST00000460064 MAP7Q14244 749 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 NFKBIBQ15653 356 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 BBS9Q3SYG4 887 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 MTERF2Q49AM1 385 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
CCDC50-203ENST00000460064 KCNF1Q9H3M0 494 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 FAM86C1Q9NVL1 165 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 CEP131Q9UPN4 1083 aa8.1□□□□□ -1.11
CCDC50-203ENST00000460064 CLEC3AO75596 197 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 TP53P04637 393 aaPredicted RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 MAP4P27816 1152 aaKnown RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 EEPD1Q7L9B9 569 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 TXNRD3Q86VQ6 643 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 DZIP1LQ8IYY4 767 aaKnown RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 EZH1Q92800 747 aaPredicted RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 MYRFLQ96LU7 910 aa8.09□□□□□ -1.11
CCDC50-203ENST00000460064 SUCOQ9UBS9 1254 aaKnown RBP8.09□□□□□ -1.11
CCDC50-203ENST00000460064 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 DYNC1LI2O43237 492 aaPredicted RBP8.08□□□□□ -1.12
CCDC50-203ENST00000460064 MRM1Q6IN84 353 aaKnown RBP8.08□□□□□ -1.12
CCDC50-203ENST00000460064 CDH24Q86UP0 819 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 FAM20CQ8IXL6 584 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 ARMC10Q8N2F6 343 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 RIN3Q8TB24 985 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 KLHL6Q8WZ60 621 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 RNPC3Q96LT9 517 aaKnown RBP8.08□□□□□ -1.12
CCDC50-203ENST00000460064 MIPEPQ99797 713 aa8.08□□□□□ -1.12
CCDC50-203ENST00000460064 TDRD10Q5VZ19 366 aaKnown RBP8.07□□□□□ -1.12
CCDC50-203ENST00000460064 LETMD1Q6P1Q0 360 aa8.07□□□□□ -1.12
CCDC50-203ENST00000460064 NLGN1Q8N2Q7 840 aa8.07□□□□□ -1.12
CCDC50-203ENST00000460064 ST13P5Q8NFI4 369 aaPredicted RBP8.07□□□□□ -1.12
CCDC50-203ENST00000460064 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
CCDC50-203ENST00000460064 PFDN2Q9UHV9 154 aa8.07□□□□□ -1.12
CCDC50-203ENST00000460064 KDM2BQ8NHM5 1336 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 C9IYK1 514 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 DHX15O43143 795 aaKnown RBP8.06□□□□□ -1.12
CCDC50-203ENST00000460064 CLSTN1O94985 981 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 SLITRK5O94991 958 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 PAOXQ6QHF9 649 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 SPATC1Q76KD6 591 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 PPFIBP1Q86W92 1011 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 CCDC144CPQ8IYA2 1237 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 ZNF512BQ96KM6 892 aaPredicted RBP8.06□□□□□ -1.12
CCDC50-203ENST00000460064 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 PRDM10Q9NQV6 1147 aa8.06□□□□□ -1.12
CCDC50-203ENST00000460064 KRBA1A5PL33 1030 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 SUSD5O60279 629 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 CDK5R2Q13319 367 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 HEATR6Q6AI08 1181 aaKnown RBP8.05□□□□□ -1.12
CCDC50-203ENST00000460064 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 SH3TC2Q8TF17 1288 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 KREMEN1Q96MU8 473 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 APBA2Q99767 749 aa8.05□□□□□ -1.12
CCDC50-203ENST00000460064 MKRN2Q9H000 416 aaKnown RBP8.05□□□□□ -1.12
CCDC50-203ENST00000460064 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
CCDC50-203ENST00000460064 CHRNA4P43681 627 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 SSRP1Q08945 709 aaKnown RBP8.04□□□□□ -1.12
CCDC50-203ENST00000460064 TCEAL1Q15170 157 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 SV2CQ496J9 727 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 AXDND1Q5T1B0 1012 aaPredicted RBP8.04□□□□□ -1.12
CCDC50-203ENST00000460064 NBPF12Q5TAG4 269 aaPredicted RBP8.04□□□□□ -1.12
CCDC50-203ENST00000460064 ADAT2Q7Z6V5 191 aaKnown RBP8.04□□□□□ -1.12
CCDC50-203ENST00000460064 CLEC10AQ8IUN9 316 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 DNAJB8Q8NHS0 232 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 GIMAP7Q8NHV1 300 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 SMARCC1Q92922 1105 aaPredicted RBP8.04□□□□□ -1.12
CCDC50-203ENST00000460064 C1GALT1Q9NS00 363 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 ZMYM5Q9UJ78 669 aa8.04□□□□□ -1.12
CCDC50-203ENST00000460064 ANKRD34BA5PLL1 514 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 C1QTNF9BB2RNN3 333 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 DIAPH1O60610 1272 aaKnown RBP8.03□□□□□ -1.12
CCDC50-203ENST00000460064 HSD3B2P26439 372 aa8.03□□□□□ -1.12
CCDC50-203ENST00000460064 ETV3P41162 512 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms