RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PPP1R2P41236 205 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 IQUBQ8NA54 791 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 MIGA1Q8NAN2 632 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 CCDC148Q8NFR7 591 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 CLIC6Q96NY7 704 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 NLRP3Q96P20 1036 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 PANX2Q96RD6 677 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 BAG1Q99933 345 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 MAGEF1Q9HAY2 307 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 SENP2Q9HC62 589 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 TRMT1Q9NXH9 659 aaKnown RBP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC3-202ENST00000459727 NFE2L3Q9Y4A8 694 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 ITIH6Q6UXX5 1313 aa10.07□□□□□ -0.8
HDAC3-202ENST00000459727 A0A1B0GUL6 1792 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 LAMB1P07942 1786 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ROBO3Q96MS0 1386 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ATP8B1O43520 1251 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 LONP1P36776 959 aaKnown RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ATP2C1P98194 919 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 FUT2Q10981 343 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 TBX2Q13207 712 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ORC2Q13416 577 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ITPK1Q13572 414 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 TTC38Q5R3I4 469 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 SH3RF1Q7Z6J0 888 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 CNGA4Q8IV77 575 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 ERCC4Q92889 916 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 CSRNP2Q9H175 543 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 HSD3B7Q9H2F3 369 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 CABP5Q9NP86 173 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 FANCLQ9NW38 375 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 SERTAD1Q9UHV2 236 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 MINPP1Q9UNW1 487 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 KCNJ14Q9UNX9 436 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 PCDHB6Q9Y5E3 794 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC3-202ENST00000459727 COL24A1Q17RW2 1714 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 KIAA1551Q9HCM1 1747 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 SYNRGQ9UMZ2 1314 aa10.06□□□□□ -0.8
HDAC3-202ENST00000459727 CACNA1SQ13698 1873 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 A0A1B0GTH6 734 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 EFCAB8A8MWE9 144 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 AKR1B15C9JRZ8 316 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 BAG3O95817 575 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 LDHCP07864 332 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CCDC175P0C221 793 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 SCG2P13521 617 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 ATP1A3P13637 1013 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 HIBADHP31937 336 aaKnown RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 GUCY1A2P33402 732 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 RPS8P62241 208 aaKnown RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 TROAPQ12815 778 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CCDC93Q567U6 631 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 JAKMIP3Q5VZ66 844 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 KRT222Q8N1A0 295 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 WDR66Q8TBY9 1149 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CCDC12Q8WUD4 166 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 ANKS1AQ92625 1134 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CCDC47Q96A33 483 aaKnown RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CUEDC2Q9H467 287 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 ZNF215Q9UL58 517 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-202ENST00000459727 CNTNAP5Q8WYK1 1306 aa10.05□□□□□ -0.8
HDAC3-202ENST00000459727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 POTEB2H3BUK9 544 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 GTPBP6O43824 516 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 TUBBP07437 444 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 NLRP5P59047 1200 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 DMTNQ08495 405 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 NR5A1Q13285 461 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 BMS1Q14692 1282 aaKnown RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 PKN1Q16512 942 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 PFKFB3Q16875 520 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 DZIP1Q86YF9 867 aaKnown RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 DAGLBQ8NCG7 672 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 NOC3LQ8WTT2 800 aaKnown RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 SDR42E1Q8WUS8 393 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 UBXN4Q92575 508 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 NSUN4Q96CB9 384 aaKnown RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 IQCDQ96DY2 449 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 FAM84BQ96KN1 310 aaPredicted RBP10.04□□□□□ -0.8
HDAC3-202ENST00000459727 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
HDAC3-202ENST00000459727 ZKSCAN3Q9BRR0 538 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms