RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 CNMDO75829 334 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 IDH1O75874 414 aaKnown RBP12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP14P54578 494 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
HDLBP-227ENST00000458564 CCNA1P78396 465 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 CCL14Q16627 93 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
HDLBP-227ENST00000458564 TDHQ8IZJ6 230 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 EAF2Q96CJ1 260 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-227ENST00000458564 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
HDLBP-227ENST00000458564 MYO5AQ9Y4I1 1855 aaKnown RBP12.73□□□□□ -0.37
HDLBP-227ENST00000458564 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 HOXC6P09630 235 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 SYN1P17600 705 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 VCAM1P19320 739 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 CCND3P30281 292 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-227ENST00000458564 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 FEZ1Q99689 392 aa12.72□□□□□ -0.37
HDLBP-227ENST00000458564 MYH1P12882 1939 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 SLC15A5A6NIM6 579 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
HDLBP-227ENST00000458564 USP5P45974 858 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 CATSPERGQ6ZRH7 1159 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 RIOK1Q9BRS2 568 aaKnown RBP12.71□□□□□ -0.37
HDLBP-227ENST00000458564 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
HDLBP-227ENST00000458564 MSCO60682 206 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 IGHA2P01877 340 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 PTPREP23469 700 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 SHMT1P34896 483 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 MAP3K12Q12852 859 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 GRB14Q14449 540 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 ABCB5Q2M3G0 1257 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 CERKLQ49MI3 558 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-227ENST00000458564 MFSD14CQ5VZR4 134 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
HDLBP-227ENST00000458564 DEFB123Q8N688 67 aa12.7□□□□□ -0.38
HDLBP-227ENST00000458564 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
HDLBP-227ENST00000458564 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
HDLBP-227ENST00000458564 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-227ENST00000458564 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 SPDYE16A6NNV3 312 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-227ENST00000458564 RLBP1P12271 317 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 GABPAQ06546 454 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
HDLBP-227ENST00000458564 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ITPRIPQ8IWB1 547 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ANTXR1Q9H6X2 564 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 CWC22Q9HCG8 908 aaKnown RBP12.69□□□□□ -0.38
HDLBP-227ENST00000458564 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 STXBP5LQ9Y2K9 1186 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 ZNF236Q9UL36 1845 aa12.69□□□□□ -0.38
HDLBP-227ENST00000458564 DLL1O00548 723 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 GUCY1A2P33402 732 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 PLCD1P51178 756 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 LPAR1Q92633 364 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-227ENST00000458564 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
HDLBP-227ENST00000458564 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
HDLBP-227ENST00000458564 DNM1LO00429 736 aa12.67□□□□□ -0.38
HDLBP-227ENST00000458564 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-227ENST00000458564 Q7L0L9 218 aa12.67□□□□□ -0.38
HDLBP-227ENST00000458564 AACSQ86V21 672 aa12.67□□□□□ -0.38
HDLBP-227ENST00000458564 A0A0G2JMZ2 1700 aa12.67□□□□□ -0.38
HDLBP-227ENST00000458564 VCANP13611 3396 aa12.67□□□□□ -0.38
HDLBP-227ENST00000458564 NAV1Q8NEY1 1877 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 CYBAP13498 195 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 ATP2B2Q01814 1243 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 SEPT2Q15019 361 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 OLFML2BQ68BL8 750 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 NPLOC4Q8TAT6 608 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.66□□□□□ -0.38
HDLBP-227ENST00000458564 CRNKL1Q9BZJ0 848 aaKnown RBP12.66□□□□□ -0.38
HDLBP-227ENST00000458564 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 CDH23Q9H251 3354 aa12.66□□□□□ -0.38
HDLBP-227ENST00000458564 EYSQ5T1H1 3165 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 A0A1W2PRG0 241 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 STRNO43815 780 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 POLR3DP05423 398 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-227ENST00000458564 PDE6AP16499 860 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 CYP2C19P33261 490 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-227ENST00000458564 COG2Q14746 738 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms