RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 TSPY8P0CW00 308 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 HOXB3P14651 431 aaPredicted RBP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 RASA1P20936 1047 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 PTMSP20962 102 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 TNNI2P48788 182 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 CDK8P49336 464 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 PLCD1P51178 756 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 ST3GAL1Q11201 340 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 SCRN1Q12765 414 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 PICALMQ13492 652 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 ARHGAP27Q6ZUM4 889 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 METTL16Q86W50 562 aaKnown RBP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 ENAHQ8N8S7 591 aaPredicted RBP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 GBP4Q96PP9 640 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 RBM28Q9NW13 759 aaKnown RBP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 SAP30BPQ9UHR5 308 aaKnown RBP10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 BRPF3Q9ULD4 1205 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 ATP6V1DQ9Y5K8 247 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 TACC3Q9Y6A5 838 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 ADAMTSL1Q8N6G6 1762 aa10.42□□□□□ -0.74
CDC42EP3-204ENST00000457889 STK36Q9NRP7 1315 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 GOLGA8AA7E2F4 631 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 PRDM1O75626 825 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 BRD1O95696 1058 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 GJB2P29033 226 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 KIF5BP33176 963 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 TFAP4Q01664 338 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 NFIAQ12857 509 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 STK3Q13188 491 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZNF654Q8IZM8 581 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 EFCAB3Q8N7B9 438 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 NECAB1Q8N987 351 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 NSUN7Q8NE18 718 aaKnown RBP10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 FAM151AQ8WW52 585 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 PRMT6Q96LA8 375 aaPredicted RBP10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 TRIM34Q9BYJ4 488 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 ZNF70Q9UC06 446 aaPredicted RBP10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 FAM198AQ9UFP1 575 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 NAP1L2Q9ULW6 460 aaPredicted RBP10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
CDC42EP3-204ENST00000457889 PTPDC1A2A3K4 754 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 H7C1D1 291 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 STX6O43752 255 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 GRIN3BO60391 1043 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 NOVP48745 357 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 GMPSP49915 693 aaPredicted RBP10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 RTN1Q16799 776 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 MICU3Q86XE3 530 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 CRACR2BQ8N4Y2 399 aaPredicted RBP10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 FAM184AQ8NB25 1140 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 WASF1Q92558 559 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 HOOK2Q96ED9 719 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 DYNLL2Q96FJ2 89 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 SYNPO2Q9UMS6 1093 aa10.4□□□□□ -0.74
CDC42EP3-204ENST00000457889 SBF1O95248 1867 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 GOLGA6L22H0YM25 854 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 WNT10BO00744 389 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 TBC1D12O60347 775 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 IFNAR1P17181 557 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 SYT1P21579 422 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 GNAQP50148 359 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 TATDN1Q6P1N9 297 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 MICALL2Q8IY33 904 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 FAM177A1Q8N128 213 aaPredicted RBP10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 FANCBQ8NB91 859 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 CTCFLQ8NI51 663 aaPredicted RBP10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 KAT14Q9H8E8 782 aa10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 IGKV6D-41A0A0C4DH26 115 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZSCAN22P10073 491 aaPredicted RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 TOP1P11387 765 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 SHMT1P34896 483 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 PRELPP51888 382 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 CCT2P78371 535 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 TROAPQ12815 778 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 KIF4BQ2VIQ3 1234 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 FAM47AQ5JRC9 791 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 RCSD1Q6JBY9 416 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 STK11IPQ8N1F8 1099 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 SLC44A5Q8NCS7 719 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 TNPO1Q92973 898 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 CSRNP1Q96S65 589 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 ZKSCAN3Q9BRR0 538 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
CDC42EP3-204ENST00000457889 GPRC5DQ9NZD1 345 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms