RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 USP17L18D6R9N7 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 USP17L22D6RA61 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 USP17L17D6RBQ6 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 USP17L19D6RCP7 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 USP17L20D6RJB6 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 ARID4AP29374 1257 aaPredicted RBP16.19■□□□□ 0.18
SNHG17-208ENST00000456953 USP17L24Q0WX57 530 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 GRB14Q14449 540 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 SLC39A5Q6ZMH5 540 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 BADQ92934 168 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 C12orf42Q96LP6 360 aa16.19■□□□□ 0.18
SNHG17-208ENST00000456953 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
SNHG17-208ENST00000456953 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.181e-323■□□□□ 9.1
SNHG17-208ENST00000456953 E9PSI1 815 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 IGHA2P01877 340 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 CYP2C19P33261 490 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 PPP4CP60510 307 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 SNX17Q15036 470 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 GJC2Q5T442 439 aaPredicted RBP16.18■□□□□ 0.18
SNHG17-208ENST00000456953 ATF7IPQ6VMQ6 1270 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 TRPV1Q8NER1 839 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 SMC4Q9NTJ3 1288 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
SNHG17-208ENST00000456953 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 UQCRFS1P1P0C7P4 283 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 CYBAP13498 195 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 MCAMP43121 646 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 TRIM60Q495X7 471 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 TJAP1Q5JTD0 557 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
SNHG17-208ENST00000456953 LBX2Q6XYB7 198 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 NPLOC4Q8TAT6 608 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 FEZ1Q99689 392 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 FOCADQ5VW36 1801 aa16.17■□□□□ 0.18
SNHG17-208ENST00000456953 GH2P01242 217 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 USP14P54578 494 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 C1orf53Q5VUE5 145 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 MEIS3Q99687 375 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 PDLIM7Q9NR12 457 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
SNHG17-208ENST00000456953 CDK5RAP2Q96SN8 1893 aa16.16■□□□□ 0.18
SNHG17-208ENST00000456953 NCOR1O75376 2440 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 VCAM1P19320 739 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 COL9A1P20849 921 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 MTX1Q13505 466 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
SNHG17-208ENST00000456953 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 KIAA1683Q9H0B3 1180 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
SNHG17-208ENST00000456953 SAP30BPQ9UHR5 308 aaKnown RBP16.15■□□□□ 0.18
SNHG17-208ENST00000456953 CHD9Q3L8U1 2897 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 SEPT4O43236 478 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 SH3RF1Q7Z6J0 888 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
SNHG17-208ENST00000456953 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
SNHG17-208ENST00000456953 API5Q9BZZ5 524 aaKnown RBP16.14■□□□□ 0.17
SNHG17-208ENST00000456953 ZNF236Q9UL36 1845 aa16.14■□□□□ 0.17
SNHG17-208ENST00000456953 SPDYE16A6NNV3 312 aaPredicted RBP16.13■□□□□ 0.17
SNHG17-208ENST00000456953 STRNO43815 780 aa16.13■□□□□ 0.17
SNHG17-208ENST00000456953 IGSF3O75054 1194 aa16.13■□□□□ 0.17
SNHG17-208ENST00000456953 ADCYAP1R1P41586 468 aa16.13■□□□□ 0.17
SNHG17-208ENST00000456953 TATDN1Q6P1N9 297 aa16.13■□□□□ 0.17
SNHG17-208ENST00000456953 ADGRA1Q86SQ6 560 aa16.13■□□□□ 0.17
SNHG17-208ENST00000456953 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
SNHG17-208ENST00000456953 GNAI3P08754 354 aa16.12■□□□□ 0.17
SNHG17-208ENST00000456953 ADORA2AP29274 412 aa16.12■□□□□ 0.17
SNHG17-208ENST00000456953 TLE2Q04725 743 aa16.12■□□□□ 0.17
SNHG17-208ENST00000456953 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
SNHG17-208ENST00000456953 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
SNHG17-208ENST00000456953 TACC3Q9Y6A5 838 aa16.12■□□□□ 0.17
SNHG17-208ENST00000456953 SLFN5Q08AF3 891 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 LRRC41Q15345 812 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 USP38Q8NB14 1042 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 ACER1Q8TDN7 264 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 FERMT2Q96AC1 680 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 EHD4Q9H223 541 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 RPAP3Q9H6T3 665 aaPredicted RBP16.11■□□□□ 0.17
SNHG17-208ENST00000456953 SNRKQ9NRH2 765 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 SERPINB13Q9UIV8 391 aa16.11■□□□□ 0.17
SNHG17-208ENST00000456953 CLTBP09497 229 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 DNAJB2P25686 324 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 EPHB4P54760 987 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
SNHG17-208ENST00000456953 PHF24Q9UPV7 400 aa16.1■□□□□ 0.17
SNHG17-208ENST00000456953 KIAA0355O15063 1070 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
SNHG17-208ENST00000456953 ITGB8P26012 769 aa16.09■□□□□ 0.17
SNHG17-208ENST00000456953 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms