RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TOP1P11387 765 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 USP14P54578 494 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 HERVK_113P62684 666 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 BRD3Q15059 726 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 CDKAL1Q5VV42 579 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 EFCAB13Q8IY85 973 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 STAMBPL1Q96FJ0 436 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 CAPZA3Q96KX2 299 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 BPIFA3Q9BQP9 254 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 POLR3EQ9NVU0 708 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 FOXO6A8MYZ6 492 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 CLGNO14967 610 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 EIF3HO15372 352 aaKnown RBP eCLIP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 CAVIN2O95810 425 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 PYGLP06737 847 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 GM2AP17900 193 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 RNASELQ05823 741 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 NPY5RQ15761 445 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 PREPLQ4J6C6 727 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 NAA35Q5VZE5 725 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 KLHL10Q6JEL2 608 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 DHX32Q7L7V1 743 aaKnown RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 N4BP2L2Q92802 583 aaPredicted RBP5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 MAN1B1Q9UKM7 699 aa5.16□□□□□ -1.58
DEPDC1-202ENST00000456315 MAST3O60307 1309 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 XIRP1Q702N8 1843 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 FGAP02671 866 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 ECHS1P30084 290 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 CCT6AP40227 531 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 UAP1Q16222 522 aaPredicted RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 JAKMIP3Q5VZ66 844 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 CADPS2Q86UW7 1296 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 SPICE1Q8N0Z3 855 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 SYNE4Q8N205 404 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 ZNF570Q96NI8 536 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 ZIM3Q96PE6 472 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 FSD1Q9BTV5 496 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 NUP58Q9BVL2 599 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 SELENOOQ9BVL4 669 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 CFAP45Q9UL16 551 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 PCDHB6Q9Y5E3 794 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 MST1RQ04912 1400 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 FAM208AQ9UK61 1670 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 FAM170AA1A519 330 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 POLR2DO15514 142 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 MAP2K1Q02750 393 aaPredicted RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 KIF4BQ2VIQ3 1234 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 ANO1Q5XXA6 986 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 CDCA2Q69YH5 1023 aaPredicted RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 CCDC73Q6ZRK6 1079 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 HDGFL2Q7Z4V5 671 aaPredicted RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 EVI5LQ96CN4 794 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 PUS3Q9BZE2 481 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 KANSL2Q9H9L4 492 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 A1CFQ9NQ94 594 aaKnown RBP5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 LEMD3Q9Y2U8 911 aa5.15□□□□□ -1.58
DEPDC1-202ENST00000456315 STK36Q9NRP7 1315 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 PCM1Q15154 2024 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 SHBGP04278 402 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 LSP1P33241 339 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 MYCBPAPQ8TBZ2 947 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 LRRC59Q96AG4 307 aaKnown RBP5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 MS4A14Q96JA4 679 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 NEUROG2Q9H2A3 272 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 PANK4Q9NVE7 773 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 GNL3LQ9NVN8 582 aaKnown RBP5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 AGAP1Q9UPQ3 857 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 ROBO2Q9HCK4 1378 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 N4BP2Q86UW6 1770 aaPredicted RBP5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 PEX19P40855 299 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 CTR9Q6PD62 1173 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 MPRIPQ6WCQ1 1025 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 HDXQ7Z353 690 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 CCDC150Q8NCX0 1101 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 AENQ8WTP8 325 aaKnown RBP5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 ZBTB10Q96DT7 871 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 CRAMP1Q96RY5 1269 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 FAM107BQ9H098 131 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 DEF6Q9H4E7 631 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 MAP3K2Q9Y2U5 619 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 MLH3Q9UHC1 1453 aa5.15□□□□□ -1.59
DEPDC1-202ENST00000456315 CEMIPQ8WUJ3 1361 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 LRRC10BA6NIK2 292 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 A8MUI8 341 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 KIF2AO00139 706 aaPredicted RBP5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 CREB1P16220 341 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 TMC4Q7Z404 712 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 MTMR8Q96EF0 704 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 ZNF594Q96JF6 807 aaPredicted RBP5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 PUS7LQ9H0K6 701 aaKnown RBP5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 SERTAD1Q9UHV2 236 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 KCNJ14Q9UNX9 436 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 SMAPO00193 183 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 MEFVO15553 781 aaPredicted RBP5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 ACTN4O43707 911 aaKnown RBP5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 SYKP43405 635 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 DDR1Q08345 913 aa5.14□□□□□ -1.59
DEPDC1-202ENST00000456315 TFCP2Q12800 502 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms