RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
PDGFB-204ENST00000455790 ECHDC1Q9NTX5 307 aa14.42□□□□□ -0.1
PDGFB-204ENST00000455790 RBPJLQ9UBG7 517 aa14.42□□□□□ -0.1
PDGFB-204ENST00000455790 GJD2Q9UKL4 321 aa14.42□□□□□ -0.1
PDGFB-204ENST00000455790 PLXNB2O15031 1838 aa14.42□□□□□ -0.1
PDGFB-204ENST00000455790 MYH7P12883 1935 aa14.41□□□□□ -0.1
PDGFB-204ENST00000455790 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
PDGFB-204ENST00000455790 TRIM32Q13049 653 aa14.41□□□□□ -0.1
PDGFB-204ENST00000455790 UBE3CQ15386 1083 aa14.41□□□□□ -0.1
PDGFB-204ENST00000455790 U2AF1L4Q8WU68 220 aaKnown RBP14.41□□□□□ -0.1
PDGFB-204ENST00000455790 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
PDGFB-204ENST00000455790 PUS7LQ9H0K6 701 aaKnown RBP14.41□□□□□ -0.1
PDGFB-204ENST00000455790 PORCNQ9H237 461 aa14.41□□□□□ -0.1
PDGFB-204ENST00000455790 BAZ2AQ9UIF9 1905 aaKnown RBP14.41□□□□□ -0.1
PDGFB-204ENST00000455790 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 MPHOSPH10O00566 681 aaKnown RBP14.4□□□□□ -0.1
PDGFB-204ENST00000455790 CNMDO75829 334 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 ERVK-9P63128 1117 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 ERVK-24P63145 666 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 Q3C1V9 767 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 UBE2Q1Q7Z7E8 422 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 GPRC5AQ8NFJ5 357 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
PDGFB-204ENST00000455790 CABP5Q9NP86 173 aa14.4□□□□□ -0.1
PDGFB-204ENST00000455790 AKR1B1P15121 316 aa14.39□□□□□ -0.11
PDGFB-204ENST00000455790 NKX2-3Q8TAU0 364 aa14.39□□□□□ -0.11
PDGFB-204ENST00000455790 TRIB2Q92519 343 aa14.39□□□□□ -0.11
PDGFB-204ENST00000455790 RPAP3Q9H6T3 665 aaPredicted RBP14.39□□□□□ -0.11
PDGFB-204ENST00000455790 PAK6Q9NQU5 681 aaPredicted RBP14.39□□□□□ -0.11
PDGFB-204ENST00000455790 ATP8A2Q9NTI2 1148 aa14.39□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L12C9JPN9 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L21D6R901 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 HMGCRP04035 888 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP14P54578 494 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 KIAA1755Q5JYT7 1200 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 CATSPERGQ6ZRH7 1159 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 KBTBD3Q8NAB2 608 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 DEFB118Q96PH6 123 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
PDGFB-204ENST00000455790 SPDYE16A6NNV3 312 aaPredicted RBP14.37□□□□□ -0.11
PDGFB-204ENST00000455790 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
PDGFB-204ENST00000455790 SGPL1O95470 568 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 CYP2B6P20813 491 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 CTR9Q6PD62 1173 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 GTF3C2Q8WUA4 911 aaPredicted RBP14.37□□□□□ -0.11
PDGFB-204ENST00000455790 OSBP2Q969R2 916 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
PDGFB-204ENST00000455790 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDGFB-204ENST00000455790 BTBD7Q9P203 1132 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
PDGFB-204ENST00000455790 CEP290O15078 2479 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 H0YGN5 161 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 MAPK4P31152 587 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 CDK8P49336 464 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 ICA1Q05084 483 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 MORN1Q5T089 497 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 ZSCAN25Q6NSZ9 544 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 C16orf86Q6ZW13 317 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 SOCS4Q8WXH5 440 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 USP6NLQ92738 828 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 STRBPQ96SI9 672 aaKnown RBP14.36□□□□□ -0.11
PDGFB-204ENST00000455790 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
PDGFB-204ENST00000455790 RANBP2P49792 3224 aaKnown RBP14.36□□□□□ -0.11
PDGFB-204ENST00000455790 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 M0R2C6 588 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 CCL14Q16627 93 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 PLEKHH3Q7Z736 793 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 SPICE1Q8N0Z3 855 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 PI4K2BQ8TCG2 481 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
PDGFB-204ENST00000455790 APPBP2Q92624 585 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 NUDT12Q9BQG2 462 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
PDGFB-204ENST00000455790 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 MYH8P13535 1937 aa14.35□□□□□ -0.11
PDGFB-204ENST00000455790 RNF113AO15541 343 aaKnown RBP14.34□□□□□ -0.11
PDGFB-204ENST00000455790 TFRCP02786 760 aaKnown RBP14.34□□□□□ -0.11
PDGFB-204ENST00000455790 MAP3K21Q5TCX8 1036 aa14.34□□□□□ -0.11
PDGFB-204ENST00000455790 TANGO6Q9C0B7 1094 aa14.34□□□□□ -0.11
PDGFB-204ENST00000455790 RLFQ13129 1914 aa14.33□□□□□ -0.11
PDGFB-204ENST00000455790 GPAA1O43292 621 aa14.33□□□□□ -0.12
PDGFB-204ENST00000455790 XRCC5P13010 732 aaKnown RBP14.33□□□□□ -0.12
PDGFB-204ENST00000455790 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms