RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
SCN5A-210ENST00000455624 VCXQ9H320 206 aa11.21□□□□□ -0.61
SCN5A-210ENST00000455624 POLR2DO15514 142 aaKnown RBP11.21□□□□□ -0.62
SCN5A-210ENST00000455624 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.62
SCN5A-210ENST00000455624 NLRP12P59046 1061 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 PLCB4Q15147 1175 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 TRIM50Q86XT4 487 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 TPH2Q8IWU9 490 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 NUP160Q12769 1436 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 KDM3AQ9Y4C1 1321 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 PPIP5K2O43314 1243 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 TNNC2P02585 160 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.62
SCN5A-210ENST00000455624 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 RAB20Q9NX57 234 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 KIF3CO14782 793 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 LRMPQ12912 555 aa11.21□□□□□ -0.62
SCN5A-210ENST00000455624 ARHGEF2Q92974 986 aaKnown RBP11.21□□□□□ -0.62
SCN5A-210ENST00000455624 LSM14BQ9BX40 385 aaKnown RBP11.21□□□□□ -0.62
SCN5A-210ENST00000455624 RNF169Q8NCN4 708 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 MIPOL1Q8TD10 442 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 FEZ2Q9UHY8 353 aaPredicted RBP11.2□□□□□ -0.62
SCN5A-210ENST00000455624 GCP02774 474 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.2□□□□□ -0.62
SCN5A-210ENST00000455624 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 MCUR1Q96AQ8 359 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.62
SCN5A-210ENST00000455624 IFRD2Q12894 506 aaPredicted RBP11.2□□□□□ -0.62
SCN5A-210ENST00000455624 GLG1Q92896 1179 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 EYA1Q99502 592 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 LLPHQ9BRT6 129 aaKnown RBP11.2□□□□□ -0.62
SCN5A-210ENST00000455624 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 GPAA1O43292 621 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 RAD51AP2Q09MP3 1159 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 ARHGAP44Q17R89 818 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 LONRF3Q496Y0 759 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 CEP104O60308 925 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 TUBBP07437 444 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 CCDC105Q8IYK2 499 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
SCN5A-210ENST00000455624 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 GNA14O95837 355 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 EVCP57679 992 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 B4GALNT4Q76KP1 1039 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 ZBTB8OSQ8IWT0 167 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 LPIN2Q92539 896 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 KDRP35968 1356 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 ERCC3P19447 782 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 HERC4Q5GLZ8 1057 aaPredicted RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 APPBP2Q92624 585 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 TESPA1A2RU30 521 aaPredicted RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 GPR162Q16538 588 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 BSPRYQ5W0U4 402 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 LMNTD2Q8IXW0 634 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 KCNG1Q9UIX4 513 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 BUB1BO60566 1050 aaPredicted RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 KRT3P12035 628 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 SH2D4BQ5SQS7 431 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 TSKSQ9UJT2 592 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 CTTNBP2Q8WZ74 1663 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 LONRF2Q1L5Z9 754 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
SCN5A-210ENST00000455624 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
SCN5A-210ENST00000455624 S100BP04271 92 aaPredicted RBP11.18□□□□□ -0.62
SCN5A-210ENST00000455624 SCYL2Q6P3W7 929 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 ARHGAP24Q8N264 748 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 INTS4Q96HW7 963 aaKnown RBP11.18□□□□□ -0.62
SCN5A-210ENST00000455624 SCYL1Q96KG9 808 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 USP21Q9UK80 565 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 LIG4P49917 911 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 MTMR3Q13615 1198 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 FAM47AQ5JRC9 791 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 PALM2Q8IXS6 379 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 CCDC170Q8IYT3 715 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 MMS19Q96T76 1030 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 USP26Q9BXU7 913 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 ANKFY1Q9P2R3 1169 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 ARPP21Q9UBL0 812 aaPredicted RBP11.18□□□□□ -0.62
SCN5A-210ENST00000455624 PARP2Q9UGN5 583 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 CAPN9O14815 690 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 GAS7O60861 476 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 KLHL30Q0D2K2 578 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 TEKT1Q969V4 418 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 FAM114A2Q9NRY5 505 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 TCP10L2B9ZVM9 353 aa11.18□□□□□ -0.62
SCN5A-210ENST00000455624 PRDM1O75626 825 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms