RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 MAP3K19Q56UN5 1328 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 MEGF6O75095 1541 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 GSC2O15499 205 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 DHX15O43143 795 aaKnown RBP5.24□□□□□ -1.57
RBM39-220ENST00000455343 IGLV1-40P01703 118 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 HOXC9P31274 260 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 CABP4P57796 275 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 DUOXA2Q1HG44 320 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 C8orf34Q49A92 452 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 NBPF6Q5VWK0 638 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 SMIM5Q71RC9 77 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 KLHDC7BQ96G42 594 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 LTV1Q96GA3 475 aaPredicted RBP5.24□□□□□ -1.57
RBM39-220ENST00000455343 NBPF4Q96M43 638 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 PUS7Q96PZ0 661 aaKnown RBP5.24□□□□□ -1.57
RBM39-220ENST00000455343 HHIPQ96QV1 700 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 KRTAP9-2Q9BYQ4 174 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 SLC12A5Q9H2X9 1139 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 OSGEPQ9NPF4 335 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 PALLDQ8WX93 1383 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 QRICH2Q9H0J4 1663 aa5.24□□□□□ -1.57
RBM39-220ENST00000455343 EDC4Q6P2E9 1401 aaKnown RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 PDE2AO00408 941 aaPredicted RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 CYP27B1O15528 508 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 TRPA1O75762 1119 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 NPR3P17342 541 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 KCNA3P22001 575 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 MTMR3Q13615 1198 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 ALKBH2Q6NS38 261 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 TMEM102Q8N9M5 508 aaPredicted RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 TTC16Q8NEE8 873 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 SMARCC1Q92922 1105 aaPredicted RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 PMEPA1Q969W9 287 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 UTP4Q969X6 686 aaKnown RBP5.23□□□□□ -1.57
RBM39-220ENST00000455343 MYRFLQ96LU7 910 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 SOX13Q9UN79 622 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 POLIQ9UNA4 740 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 PXDNLA1KZ92 1463 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 LY75O60449 1722 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 C10orf71Q711Q0 1435 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 NSD3Q9BZ95 1437 aa5.23□□□□□ -1.57
RBM39-220ENST00000455343 RGPD5Q99666 1765 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 USP54Q70EL1 1684 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 A0A1W2PP64 1363 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 A0A0G2JLW4 131 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 MMP10P09238 476 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 FBLN1P23142 703 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 SSTR4P31391 388 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 CD97P48960 835 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 MPRIPQ6WCQ1 1025 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 HDGFL2Q7Z4V5 671 aaPredicted RBP5.22□□□□□ -1.57
RBM39-220ENST00000455343 LINC00116Q8NCU8 138 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 PIGBQ92521 554 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 C7orf69Q9H7B7 122 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 PCMTD2Q9NV79 361 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 PCDH11XQ9BZA7 1347 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 PCDH11YQ9BZA8 1340 aa5.22□□□□□ -1.57
RBM39-220ENST00000455343 TUBGCP6Q96RT7 1819 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 EREGO14944 169 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 PHACTR2O75167 634 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 TNFRSF21O75509 655 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 HSPA1AP0DMV8 641 aaKnown RBP5.21□□□□□ -1.58
RBM39-220ENST00000455343 HSPA1BP0DMV9 641 aaKnown RBP5.21□□□□□ -1.58
RBM39-220ENST00000455343 DPEP1P16444 411 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 AMPHP49418 695 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 NLRP12P59046 1061 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 ITPK1Q13572 414 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 C9orf131Q5VYM1 1079 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 ANKRD34AQ69YU3 496 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.21□□□□□ -1.58
RBM39-220ENST00000455343 ARHGAP27Q6ZUM4 889 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 ZDHHC13Q8IUH4 622 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 NLGN1Q8N2Q7 840 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 SNX29Q8TEQ0 813 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 SLC7A3Q8WY07 619 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 RAPGEF4Q8WZA2 1011 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 OSMRQ99650 979 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 ZKSCAN3Q9BRR0 538 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 TERF2IPQ9NYB0 399 aa5.21□□□□□ -1.58
RBM39-220ENST00000455343 FAM208AQ9UK61 1670 aaKnown RBP5.21□□□□□ -1.58
RBM39-220ENST00000455343 RTL1A6NKG5 1358 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 ROCK2O75116 1388 aaKnown RBP5.2□□□□□ -1.58
RBM39-220ENST00000455343 PLEKHG2Q9H7P9 1386 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 KIAA1324LA8MWY0 1029 aaPredicted RBP5.2□□□□□ -1.58
RBM39-220ENST00000455343 FAM13AO94988 1023 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 TGFB1P01137 390 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 EDN3P14138 238 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 PREPP48147 710 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 EHHADHQ08426 723 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 NFIAQ12857 509 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 HGSNATQ68CP4 663 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 RNF43Q68DV7 783 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 PHLDB3Q6NSJ2 640 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 TRIM42Q8IWZ5 723 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 FAM20CQ8IXL6 584 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 C16orf71Q8IYS4 520 aaPredicted RBP5.2□□□□□ -1.58
RBM39-220ENST00000455343 USHBP1Q8N6Y0 703 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms