RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CYP2B6P20813 491 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 ERVK-9P63128 1117 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 ERVK-24P63145 666 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 KIAA1755Q5JYT7 1200 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 DNAJC2Q99543 621 aaKnown RBP19.5■□□□□ 0.71
GPC1-206ENST00000455111 TRIM34Q9BYJ4 488 aa19.5■□□□□ 0.71
GPC1-206ENST00000455111 DCP1AQ9NPI6 582 aaPredicted RBP19.5■□□□□ 0.71
GPC1-206ENST00000455111 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
GPC1-206ENST00000455111 SEPT2Q15019 361 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 CCL14Q16627 93 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 ABCB5Q2M3G0 1257 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 CERKLQ49MI3 558 aaPredicted RBP19.49■□□□□ 0.71
GPC1-206ENST00000455111 HSP90AB4PQ58FF6 505 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 MORN1Q5T089 497 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 CLASRPQ8N2M8 674 aaKnown RBP19.49■□□□□ 0.71
GPC1-206ENST00000455111 GPRC5AQ8NFJ5 357 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 PAWRQ96IZ0 340 aaKnown RBP19.49■□□□□ 0.71
GPC1-206ENST00000455111 ARMT1Q9H993 441 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 BTBD7Q9P203 1132 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 RCAN3Q9UKA8 241 aa19.49■□□□□ 0.71
GPC1-206ENST00000455111 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
GPC1-206ENST00000455111 TFRCP02786 760 aaKnown RBP19.48■□□□□ 0.71
GPC1-206ENST00000455111 VCAM1P19320 739 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 ADD2P35612 726 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 CATSPERGQ6ZRH7 1159 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 GPR142Q7Z601 462 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 TTC6Q86TZ1 520 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 CERS3Q8IU89 383 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 CLEC10AQ8IUN9 316 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 SIAH1Q8IUQ4 282 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 PAGR1Q9BTK6 254 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 KIAA1683Q9H0B3 1180 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 BCL11AQ9H165 835 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 BOLA2Q9H3K6 86 aa19.48■□□□□ 0.71
GPC1-206ENST00000455111 GREB1LQ9C091 1923 aaPredicted RBP19.48■□□□□ 0.71
GPC1-206ENST00000455111 TTF1Q15361 905 aaPredicted RBP19.47■□□□□ 0.71
GPC1-206ENST00000455111 TMED8Q6PL24 325 aaPredicted RBP19.47■□□□□ 0.71
GPC1-206ENST00000455111 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
GPC1-206ENST00000455111 RPTORQ8N122 1335 aa19.47■□□□□ 0.71
GPC1-206ENST00000455111 COL11A1P12107 1806 aaPredicted RBP19.46■□□□□ 0.71
GPC1-206ENST00000455111 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 RAB11FIP3O75154 756 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 IFIT2P09913 472 aaKnown RBP19.46■□□□□ 0.71
GPC1-206ENST00000455111 ATP5JP18859 108 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 HAUS7Q99871 368 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
GPC1-206ENST00000455111 SPDYE16A6NNV3 312 aaPredicted RBP19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L15C9J2P7 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L13C9JLJ4 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L11C9JVI0 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L18D6R9N7 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L22D6RA61 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L17D6RBQ6 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L19D6RCP7 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L20D6RJB6 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 IGHA2P01877 340 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 MS4A1P11836 297 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 XRCC5P13010 732 aaKnown RBP19.45■□□□□ 0.7
GPC1-206ENST00000455111 CACNB2Q08289 660 aaPredicted RBP19.45■□□□□ 0.7
GPC1-206ENST00000455111 USP17L24Q0WX57 530 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 OGDHLQ9ULD0 1010 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 ZNF236Q9UL36 1845 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 TRIOBPQ9H2D6 2365 aa19.45■□□□□ 0.7
GPC1-206ENST00000455111 MBD4O95243 580 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 POLR3DP05423 398 aaPredicted RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 PRKAR2AP13861 404 aaKnown RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 AKR1B1P15121 316 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 CCND3P30281 292 aaPredicted RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 LHX8Q68G74 356 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 LBX2Q6XYB7 198 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 FEZ1Q99689 392 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 NUDT12Q9BQG2 462 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 CRNKL1Q9BZJ0 848 aaKnown RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 HMX1Q9NP08 348 aaPredicted RBP19.44■□□□□ 0.7
GPC1-206ENST00000455111 RABGAP1Q9Y3P9 1069 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 PFASO15067 1338 aa19.44■□□□□ 0.7
GPC1-206ENST00000455111 HMMRO75330 724 aa19.43■□□□□ 0.7
GPC1-206ENST00000455111 MAPK4P31152 587 aa19.43■□□□□ 0.7
GPC1-206ENST00000455111 PLEKHH3Q7Z736 793 aa19.43■□□□□ 0.7
GPC1-206ENST00000455111 NPLOC4Q8TAT6 608 aa19.42■□□□□ 0.7
GPC1-206ENST00000455111 SOCS4Q8WXH5 440 aa19.42■□□□□ 0.7
GPC1-206ENST00000455111 PUS7LQ9H0K6 701 aaKnown RBP19.42■□□□□ 0.7
GPC1-206ENST00000455111 USP14P54578 494 aa19.41■□□□□ 0.7
GPC1-206ENST00000455111 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
GPC1-206ENST00000455111 GTF3C2Q8WUA4 911 aaPredicted RBP19.41■□□□□ 0.7
GPC1-206ENST00000455111 CABP5Q9NP86 173 aa19.41■□□□□ 0.7
GPC1-206ENST00000455111 SOX1O00570 391 aaPredicted RBP19.4■□□□□ 0.7
GPC1-206ENST00000455111 PTPREP23469 700 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 PDE3AQ14432 1141 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 C12orf60Q5U649 245 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 TSHZ3Q63HK5 1081 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 NECAB2Q7Z6G3 386 aa19.4■□□□□ 0.7
GPC1-206ENST00000455111 TRPV1Q8NER1 839 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms