RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 DGKHQ86XP1 1220 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 GTF3C2Q8WUA4 911 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-205ENST00000454964 MKL1Q969V6 931 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 UBAC1Q9BSL1 405 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 AFG3L2Q9Y4W6 797 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 SSC5DA1L4H1 1573 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
ATXN3-205ENST00000454964 PLIN4Q96Q06 1357 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 MYH4Q9Y623 1939 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 FOXP2O15409 715 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 FDX1P10109 184 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 MCM5P33992 734 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 HSPA4P34932 840 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 BACE1P56817 501 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 PTH1RQ03431 593 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 CTDSPL2Q05D32 466 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 FMR1Q06787 632 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATXN3-205ENST00000454964 ARHGEF6Q15052 776 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 SH3D19Q5HYK7 790 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 CHMP4CQ96CF2 233 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 OTUD5Q96G74 571 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 FEZ1Q99689 392 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 DNAJC18Q9H819 358 aa11.18□□□□□ -0.62
ATXN3-205ENST00000454964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATXN3-205ENST00000454964 IRF6O14896 467 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 CYP21A2P08686 494 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 CYP2D6P10635 497 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 OSBPP22059 807 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 VEGFBP49765 207 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 ICA1Q05084 483 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 SPP2Q13103 211 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 CREB3L3Q68CJ9 461 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 DLK2Q6UY11 383 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 CDAN1Q8IWY9 1227 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 USP26Q9BXU7 913 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 SAGE1Q9NXZ1 904 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 MTMR4Q9NYA4 1195 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 PNMA2Q9UL42 364 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 TMX2Q9Y320 296 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
ATXN3-205ENST00000454964 CYP2D7A0A087X1C5 515 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 A0A0G2JLL6 359 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-205ENST00000454964 FAM155AB1AL88 458 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-205ENST00000454964 E7EWF7 191 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 SLC27A2O14975 620 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 HAND2P61296 217 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 SEPT2Q15019 361 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
ATXN3-205ENST00000454964 CYP4F22Q6NT55 531 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 PRRT2Q7Z6L0 340 aaPredicted RBP11.16□□□□□ -0.62
ATXN3-205ENST00000454964 ANKRD23Q86SG2 305 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 ANKS1AQ92625 1134 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 KCNB2Q92953 911 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 CLMNQ96JQ2 1002 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 C12orf42Q96LP6 360 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 NEK1Q96PY6 1258 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 TM6SF1Q9BZW5 370 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 HOXC10Q9NYD6 342 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 ZSWIM5Q9P217 1185 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 PHIPQ8WWQ0 1821 aa11.16□□□□□ -0.62
ATXN3-205ENST00000454964 CCL15-CCL14A0A0B4J2E2 113 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 GDF11O95390 407 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CALM1P0DP23 149 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CALM2P0DP24 149 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CALM3P0DP25 149 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 TOP1P11387 765 aaKnown RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 AKR1B1P15121 316 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 NOVP48745 357 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 TRAF1Q13077 416 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CCL15Q16663 113 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 NOM1Q5C9Z4 860 aaKnown RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 DHX32Q7L7V1 743 aaKnown RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 GMCL1P1Q8NEA9 526 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CHURC1Q8WUH1 139 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CFHR5Q9BXR6 569 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CLIP2Q9UDT6 1046 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 PTPRFP10586 1907 aa11.15□□□□□ -0.62
ATXN3-205ENST00000454964 CEP350Q5VT06 3117 aa11.15□□□□□ -0.63
ATXN3-205ENST00000454964 MYPNQ86TC9 1320 aa11.14□□□□□ -0.63
ATXN3-205ENST00000454964 GREB1LQ9C091 1923 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms